G1049723



Basic Information


Item Value
gene id G1049723
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 22689756 ~ 22689994 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1196241
ctgaatgactgtgtgataacgctctcggtagccaatgtgaacaaaaccttttaacaagtcaacattcacaaagtcgctgggccagacagattaccaggacgtgtactcaaagcatgcacggaccaactgtaaagtgtcttcactgacattttcaacctctccctgaccgagtctgtaatacctacatgtttcaagcagaccaccatagtccctgtacccaaggaagtgaaggtaacttg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1196241 True 239 lncRNA 0.46 1 22689756 22689994

Neighbor


gene id symbol gene type direction distance location
LOC110537219 LOC106603252 coding downstream 19078 22665662 ~ 22670678 (-)
LOC118937647 NA coding downstream 24138 22663283 ~ 22665618 (-)
LOC118937813 LOC106604822 coding downstream 26776 22659615 ~ 22662980 (-)
LOC118937649 LOC106603247 coding downstream 48537 22638989 ~ 22641219 (-)
LOC118937648 NA coding downstream 63849 22624544 ~ 22625907 (-)
LOC110537220 NA coding upstream 3705 22693699 ~ 22756982 (-)
LOC110537223 LOC106568102 coding upstream 79889 22769883 ~ 22779486 (-)
LOC118937814 NA coding upstream 102114 22792108 ~ 22796733 (-)
LOC110537224 LOC106568099 coding upstream 133894 22823888 ~ 22859633 (-)
LOC110537225 LOC106568098 coding upstream 172268 22862262 ~ 22869968 (-)
G1049713 NA non-coding downstream 13576 22675442 ~ 22676180 (-)
G1049711 NA non-coding downstream 16694 22672764 ~ 22673062 (-)
G1049666 LOC106568124 non-coding downstream 122846 22561152 ~ 22566910 (-)
G1049658 NA non-coding downstream 136186 22553367 ~ 22553570 (-)
G1049656 NA non-coding downstream 138554 22550926 ~ 22551202 (-)
G1049726 NA non-coding upstream 10604 22700598 ~ 22700972 (-)
G1049753 NA non-coding upstream 70158 22760152 ~ 22760393 (-)
G1050155 NA non-coding upstream 131047 22821041 ~ 22821486 (-)
G1050156 NA non-coding upstream 131522 22821516 ~ 22821718 (-)
G1050157 NA non-coding upstream 132222 22822216 ~ 22822439 (-)
G1049722 NA other downstream 159 22689161 ~ 22689597 (-)
LOC110536820 LOC106603249 other downstream 48157 22607858 ~ 22654480 (-)
LOC110537218 LOC106568105 other downstream 143099 22540032 ~ 22546807 (-)
G1049389 NA other downstream 349247 22337086 ~ 22340509 (-)
G1049089 NA other downstream 564852 22113948 ~ 22178642 (-)
G1050429 NA other upstream 553643 23243637 ~ 23244270 (-)
G1052040 acaca other upstream 1864703 24554697 ~ 24555000 (-)
LOC118936414 NA other upstream 1914286 24600309 ~ 24607820 (-)
G1054211 NA other upstream 2933885 25623879 ~ 25624637 (-)
G1054232 NA other upstream 2967275 25657269 ~ 25659005 (-)

Expression



Co-expression Network