Gene
RNA
| Item | Value |
|---|---|
| gene id | G1050504 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 23348123 ~ 23348463 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein LDOC1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1197086 | True | 341 | lncRNA | 0.54 | 1 | 23348123 | 23348463 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537227 | LOC106568097 | coding | downstream | 466199 | 22879185 ~ 22881924 (-) |
| LOC110537225 | LOC106568098 | coding | downstream | 478155 | 22862262 ~ 22869968 (-) |
| LOC110537224 | LOC106568099 | coding | downstream | 488490 | 22823888 ~ 22859633 (-) |
| LOC118937814 | NA | coding | downstream | 551390 | 22792108 ~ 22796733 (-) |
| LOC110537223 | LOC106568102 | coding | downstream | 568637 | 22769883 ~ 22779486 (-) |
| LOC118937815 | LOC106568112 | coding | upstream | 89255 | 23437718 ~ 23438711 (-) |
| LOC118937816 | LOC106568112 | coding | upstream | 105014 | 23453477 ~ 23454855 (-) |
| LOC110536822 | LOC106568111 | coding | upstream | 109120 | 23457583 ~ 23460327 (-) |
| LOC110537230 | LOC106568094 | coding | upstream | 370635 | 23719098 ~ 23951744 (-) |
| LOC110537232 | LOC106568092 | coding | upstream | 676911 | 24025374 ~ 24046364 (-) |
| G1050503 | NA | non-coding | downstream | 695 | 23346828 ~ 23347428 (-) |
| G1050502 | NA | non-coding | downstream | 1644 | 23346260 ~ 23346479 (-) |
| G1050493 | NA | non-coding | downstream | 14246 | 23333602 ~ 23333877 (-) |
| G1050476 | NA | non-coding | downstream | 39533 | 23308283 ~ 23308590 (-) |
| G1050472 | NA | non-coding | downstream | 46637 | 23301244 ~ 23301486 (-) |
| G1050505 | NA | non-coding | upstream | 4184 | 23352647 ~ 23352859 (-) |
| G1050509 | NA | non-coding | upstream | 9493 | 23357956 ~ 23358175 (-) |
| G1050513 | NA | non-coding | upstream | 19481 | 23367944 ~ 23368153 (-) |
| G1050523 | NA | non-coding | upstream | 24946 | 23373409 ~ 23373622 (-) |
| G1050532 | NA | non-coding | upstream | 28483 | 23376946 ~ 23377220 (-) |
| G1050429 | NA | other | downstream | 103853 | 23243637 ~ 23244270 (-) |
| G1049722 | NA | other | downstream | 658526 | 22689161 ~ 22689597 (-) |
| LOC110536820 | LOC106603249 | other | downstream | 706524 | 22607858 ~ 22654480 (-) |
| LOC110537218 | LOC106568105 | other | downstream | 801466 | 22540032 ~ 22546807 (-) |
| G1049389 | NA | other | downstream | 1007614 | 22337086 ~ 22340509 (-) |
| G1052040 | acaca | other | upstream | 1206234 | 24554697 ~ 24555000 (-) |
| LOC118936414 | NA | other | upstream | 1255817 | 24600309 ~ 24607820 (-) |
| G1054211 | NA | other | upstream | 2275416 | 25623879 ~ 25624637 (-) |
| G1054232 | NA | other | upstream | 2308806 | 25657269 ~ 25659005 (-) |
| G1055010 | NA | other | upstream | 3632320 | 26980783 ~ 26982355 (-) |
