G1051534


Basic Information

Item Value
gene id G1051534
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 24177430 ~ 24177934 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1198209
ttattatatcagCTTACAAATCAGCATCACAACTAGGGCTATTGTTTCTGGATCAAAGCATTGTTTATAcaccatatatacaaaagtatgtggacacctcttcaaatgagtggattcggatATTTCAggcacacctgttgctgacaggtgtataaaattgagcacacagccatgcaatctcaatagacaaacattggtagtagaatggcccatactgaagcgctcagtgactttcaacgtgttTACAATGacgacattctagatgattctgtgctccaactttgtggcaacagtttggggaaggccctttccagtttcagtatgacaatgcccccgtgcacaaagcgaggtccatatagaagtggtttgtcgagatcggtgtggaagaacttgactggcctgcacagagccctgacctcaactccatcaaacacctttgggatgaattggaacgctgactgcgagccaggcctaatcgcccaacatcagtgcccgacctcactag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1198209 True 505 TUCP 0.45 1 24177430 24177934

Neighbor

gene id symbol gene type direction distance location
LOC118937879 NA coding upstream 51036 24125996 ~ 24126394 (+)
LOC110536823 LOC106603263 coding upstream 468500 23493577 ~ 23708930 (+)
LOC110537229 LOC106603262 coding upstream 893705 23129878 ~ 23283725 (+)
LOC110539133 avr3 coding upstream 1242836 22933325 ~ 22934594 (+)
LOC110539134 avr3 coding upstream 1258396 22917759 ~ 22919034 (+)
LOC110537237 LOC106568088 coding downstream 230461 24408395 ~ 24416737 (+)
acaca acaca coding downstream 364788 24542722 ~ 24591683 (+)
LOC110537248 LOC106568075 coding downstream 979513 25157447 ~ 25174348 (+)
LOC110537249 LOC106568074 coding downstream 997633 25175567 ~ 25193625 (+)
LOC110537250 LOC106603285 coding downstream 1021022 25198956 ~ 25238099 (+)
G1051073 NA non-coding upstream 83103 24088578 ~ 24094327 (+)
G1051032 NA non-coding upstream 107113 24037107 ~ 24070317 (+)
G1051035 NA non-coding upstream 135405 24041211 ~ 24042025 (+)
G1050979 NA non-coding upstream 153124 24024003 ~ 24024306 (+)
G1050888 NA non-coding upstream 339935 23814084 ~ 23837495 (+)
G1051556 NA non-coding downstream 18572 24196506 ~ 24196765 (+)
G1051585 NA non-coding downstream 38767 24216701 ~ 24216909 (+)
G1051586 NA non-coding downstream 39119 24217053 ~ 24217284 (+)
G1051621 NA non-coding downstream 60743 24238677 ~ 24238950 (+)
G1051643 NA non-coding downstream 77824 24255758 ~ 24255983 (+)
G1049629 LOC106456187 other upstream 1439764 22728930 ~ 22737666 (+)
G1049502 NA other upstream 1651198 22525941 ~ 22526232 (+)
G1048417 LOC106568221 other upstream 2342618 21833094 ~ 21834812 (+)
LOC110537158 LOC106568186 other upstream 3485688 20667957 ~ 20694090 (+)
G1046929 NA other upstream 3665911 20509269 ~ 20511519 (+)
LOC110537258 msi2h other downstream 1174650 25352530 ~ 25719607 (+)
LOC110537260 LOC106567764 other downstream 1651827 25796348 ~ 25836166 (+)
G1052922 LOC106567769 other downstream 1719598 25897532 ~ 25899724 (+)
G1052923 NA other downstream 1724385 25902319 ~ 25905315 (+)
G1055498 LOC106568053 other downstream 3383437 27561371 ~ 27562671 (+)

Expression


Co-expression Network