Gene
RNA
| Item | Value |
|---|---|
| gene id | G1052040 |
| gene name | acaca |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 24554697 ~ 24555000 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| acaca | Predicted to enable ATP binding activity; acetyl-CoA carboxylase activity; and metal ion binding activity. Acts upstream of or within response to (R)-carnitine. Is expressed in liver and male organism. Orthologous to human ACACA (acetyl-CoA carboxylase alpha). |
| description |
|---|
| acetyl-CoA carboxylase-like isoform X7 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1198735 | True | 304 | TUCP | 0.59 | 1 | 24554697 | 24555000 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537235 | LOC106568090 | coding | downstream | 432636 | 24095480 ~ 24122061 (-) |
| LOC110537234 | LOC106568091 | coding | downstream | 464603 | 24062473 ~ 24090094 (-) |
| LOC110537233 | LOC106568122 | coding | downstream | 496234 | 24049874 ~ 24058463 (-) |
| LOC110537232 | LOC106568092 | coding | downstream | 508333 | 24025374 ~ 24046364 (-) |
| LOC110537230 | LOC106568094 | coding | downstream | 602953 | 23719098 ~ 23951744 (-) |
| LOC118936414 | NA | coding | upstream | 45309 | 24600309 ~ 24607820 (-) |
| LOC110537239 | aatf | coding | upstream | 53246 | 24608246 ~ 24617116 (-) |
| LOC110537240 | lhx1 | coding | upstream | 62183 | 24617118 ~ 24623412 (-) |
| mrm1 | mrm1 | coding | upstream | 165384 | 24720384 ~ 24725396 (-) |
| LOC110536825 | LOC106603276 | coding | upstream | 172999 | 24727999 ~ 24730374 (-) |
| G1052039 | NA | non-coding | downstream | 764 | 24553644 ~ 24553933 (-) |
| G1052038 | NA | non-coding | downstream | 1067 | 24553419 ~ 24553630 (-) |
| G1052025 | NA | non-coding | downstream | 22261 | 24532112 ~ 24532436 (-) |
| G1052024 | NA | non-coding | downstream | 22988 | 24531479 ~ 24531709 (-) |
| G1051936 | NA | non-coding | downstream | 122384 | 24432038 ~ 24432313 (-) |
| G1052041 | LOC104950802 | non-coding | upstream | 138 | 24555138 ~ 24555382 (-) |
| G1052054 | NA | non-coding | upstream | 15804 | 24570804 ~ 24571020 (-) |
| G1052073 | NA | non-coding | upstream | 34930 | 24589930 ~ 24592772 (-) |
| G1052080 | NA | non-coding | upstream | 42867 | 24597867 ~ 24598128 (-) |
| G1050429 | NA | other | downstream | 1310427 | 23243637 ~ 23244270 (-) |
| G1049722 | NA | other | downstream | 1865100 | 22689161 ~ 22689597 (-) |
| LOC110536820 | LOC106603249 | other | downstream | 1913098 | 22607858 ~ 22654480 (-) |
| LOC110537218 | LOC106568105 | other | downstream | 2008040 | 22540032 ~ 22546807 (-) |
| G1049389 | NA | other | downstream | 2214188 | 22337086 ~ 22340509 (-) |
| G1054211 | NA | other | upstream | 1068879 | 25623879 ~ 25624637 (-) |
| G1054232 | NA | other | upstream | 1102269 | 25657269 ~ 25659005 (-) |
| G1055010 | NA | other | upstream | 2425783 | 26980783 ~ 26982355 (-) |
| G1055199 | NA | other | upstream | 2590210 | 27145210 ~ 27145493 (-) |
