Gene
RNA
| Item | Value |
|---|---|
| gene id | G1052041 |
| gene name | LOC104950802 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 24555138 ~ 24555382 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein cypCar_00047895, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1198736 | True | 245 | lncRNA | 0.54 | 1 | 24555138 | 24555382 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537235 | LOC106568090 | coding | downstream | 433077 | 24095480 ~ 24122061 (-) |
| LOC110537234 | LOC106568091 | coding | downstream | 465044 | 24062473 ~ 24090094 (-) |
| LOC110537233 | LOC106568122 | coding | downstream | 496675 | 24049874 ~ 24058463 (-) |
| LOC110537232 | LOC106568092 | coding | downstream | 508774 | 24025374 ~ 24046364 (-) |
| LOC110537230 | LOC106568094 | coding | downstream | 603394 | 23719098 ~ 23951744 (-) |
| LOC118936414 | NA | coding | upstream | 44927 | 24600309 ~ 24607820 (-) |
| LOC110537239 | aatf | coding | upstream | 52864 | 24608246 ~ 24617116 (-) |
| LOC110537240 | lhx1 | coding | upstream | 61801 | 24617118 ~ 24623412 (-) |
| mrm1 | mrm1 | coding | upstream | 165002 | 24720384 ~ 24725396 (-) |
| LOC110536825 | LOC106603276 | coding | upstream | 172617 | 24727999 ~ 24730374 (-) |
| G1052039 | NA | non-coding | downstream | 1205 | 24553644 ~ 24553933 (-) |
| G1052038 | NA | non-coding | downstream | 1508 | 24553419 ~ 24553630 (-) |
| G1052025 | NA | non-coding | downstream | 22702 | 24532112 ~ 24532436 (-) |
| G1052024 | NA | non-coding | downstream | 23429 | 24531479 ~ 24531709 (-) |
| G1051936 | NA | non-coding | downstream | 122825 | 24432038 ~ 24432313 (-) |
| G1052054 | NA | non-coding | upstream | 15422 | 24570804 ~ 24571020 (-) |
| G1052073 | NA | non-coding | upstream | 34548 | 24589930 ~ 24592772 (-) |
| G1052080 | NA | non-coding | upstream | 42485 | 24597867 ~ 24598128 (-) |
| G1052040 | acaca | other | downstream | 138 | 24554697 ~ 24555000 (-) |
| G1050429 | NA | other | downstream | 1310868 | 23243637 ~ 23244270 (-) |
| G1049722 | NA | other | downstream | 1865541 | 22689161 ~ 22689597 (-) |
| LOC110536820 | LOC106603249 | other | downstream | 1913539 | 22607858 ~ 22654480 (-) |
| LOC110537218 | LOC106568105 | other | downstream | 2008481 | 22540032 ~ 22546807 (-) |
| G1054211 | NA | other | upstream | 1068497 | 25623879 ~ 25624637 (-) |
| G1054232 | NA | other | upstream | 1101887 | 25657269 ~ 25659005 (-) |
| G1055010 | NA | other | upstream | 2425401 | 26980783 ~ 26982355 (-) |
| G1055199 | NA | other | upstream | 2589828 | 27145210 ~ 27145493 (-) |
