Gene
RNA
| Item | Value |
|---|---|
| gene id | G1052080 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 24597867 ~ 24598128 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1198777 | True | 262 | lncRNA | 0.42 | 1 | 24597867 | 24598128 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537235 | LOC106568090 | coding | downstream | 475806 | 24095480 ~ 24122061 (-) |
| LOC110537234 | LOC106568091 | coding | downstream | 507773 | 24062473 ~ 24090094 (-) |
| LOC110537233 | LOC106568122 | coding | downstream | 539404 | 24049874 ~ 24058463 (-) |
| LOC110537232 | LOC106568092 | coding | downstream | 551503 | 24025374 ~ 24046364 (-) |
| LOC110537230 | LOC106568094 | coding | downstream | 646123 | 23719098 ~ 23951744 (-) |
| LOC118936414 | NA | coding | upstream | 2181 | 24600309 ~ 24607820 (-) |
| LOC110537239 | aatf | coding | upstream | 10118 | 24608246 ~ 24617116 (-) |
| LOC110537240 | lhx1 | coding | upstream | 19055 | 24617118 ~ 24623412 (-) |
| mrm1 | mrm1 | coding | upstream | 122256 | 24720384 ~ 24725396 (-) |
| LOC110536825 | LOC106603276 | coding | upstream | 129871 | 24727999 ~ 24730374 (-) |
| G1052073 | NA | non-coding | downstream | 5095 | 24589930 ~ 24592772 (-) |
| G1052054 | NA | non-coding | downstream | 26847 | 24570804 ~ 24571020 (-) |
| G1052041 | LOC104950802 | non-coding | downstream | 42485 | 24555138 ~ 24555382 (-) |
| G1052039 | NA | non-coding | downstream | 43934 | 24553644 ~ 24553933 (-) |
| G1052038 | NA | non-coding | downstream | 44237 | 24553419 ~ 24553630 (-) |
| G1052113 | NA | non-coding | upstream | 32609 | 24630737 ~ 24633618 (-) |
| G1052118 | NA | non-coding | upstream | 37649 | 24635777 ~ 24636076 (-) |
| G1052040 | acaca | other | downstream | 42867 | 24554697 ~ 24555000 (-) |
| G1050429 | NA | other | downstream | 1353597 | 23243637 ~ 23244270 (-) |
| G1049722 | NA | other | downstream | 1908270 | 22689161 ~ 22689597 (-) |
| LOC110536820 | LOC106603249 | other | downstream | 1956268 | 22607858 ~ 22654480 (-) |
| LOC110537218 | LOC106568105 | other | downstream | 2051210 | 22540032 ~ 22546807 (-) |
| G1054211 | NA | other | upstream | 1025751 | 25623879 ~ 25624637 (-) |
| G1054232 | NA | other | upstream | 1059141 | 25657269 ~ 25659005 (-) |
| G1055010 | NA | other | upstream | 2382655 | 26980783 ~ 26982355 (-) |
| G1055199 | NA | other | upstream | 2547082 | 27145210 ~ 27145493 (-) |
