Gene
RNA
| Item | Value |
|---|---|
| gene id | G1052113 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 24630737 ~ 24633618 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1198820 | True | 220 | lncRNA | 0.46 | 2 | 24630737 | 24633618 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537240 | lhx1 | coding | downstream | 7325 | 24617118 ~ 24623412 (-) |
| LOC110537239 | aatf | coding | downstream | 13621 | 24608246 ~ 24617116 (-) |
| LOC118936414 | NA | coding | downstream | 23185 | 24600309 ~ 24607820 (-) |
| LOC110537235 | LOC106568090 | coding | downstream | 508676 | 24095480 ~ 24122061 (-) |
| LOC110537234 | LOC106568091 | coding | downstream | 540643 | 24062473 ~ 24090094 (-) |
| mrm1 | mrm1 | coding | upstream | 86766 | 24720384 ~ 24725396 (-) |
| LOC110536825 | LOC106603276 | coding | upstream | 94381 | 24727999 ~ 24730374 (-) |
| LOC100301685 | rdh12 | coding | upstream | 101293 | 24734911 ~ 24737099 (-) |
| LOC110537242 | LOC106568081 | coding | upstream | 104254 | 24737872 ~ 24746999 (-) |
| LOC110537244 | LOC106568079 | coding | upstream | 117988 | 24751606 ~ 24978957 (-) |
| G1052080 | NA | non-coding | downstream | 32609 | 24597867 ~ 24598128 (-) |
| G1052073 | NA | non-coding | downstream | 37965 | 24589930 ~ 24592772 (-) |
| G1052118 | NA | non-coding | upstream | 2159 | 24635777 ~ 24636076 (-) |
| G1053682 | NA | non-coding | upstream | 215394 | 24849012 ~ 24851195 (-) |
| G1053709 | NA | non-coding | upstream | 261292 | 24894910 ~ 24895331 (-) |
| G1053733 | NA | non-coding | upstream | 290956 | 24924574 ~ 24947891 (-) |
| LOC110537246 | LOC106568078 | non-coding | upstream | 403368 | 25036828 ~ 25142397 (-) |
| G1052040 | acaca | other | downstream | 75737 | 24554697 ~ 24555000 (-) |
| G1050429 | NA | other | downstream | 1386467 | 23243637 ~ 23244270 (-) |
| G1049722 | NA | other | downstream | 1941140 | 22689161 ~ 22689597 (-) |
| LOC110536820 | LOC106603249 | other | downstream | 1989138 | 22607858 ~ 22654480 (-) |
| G1054211 | NA | other | upstream | 990261 | 25623879 ~ 25624637 (-) |
| G1054232 | NA | other | upstream | 1023651 | 25657269 ~ 25659005 (-) |
| G1055010 | NA | other | upstream | 2347165 | 26980783 ~ 26982355 (-) |
| G1055199 | NA | other | upstream | 2511592 | 27145210 ~ 27145493 (-) |
| G1056225 | NA | other | upstream | 3344408 | 27978026 ~ 27978436 (-) |
