Gene
RNA
| Item | Value |
|---|---|
| gene id | G1053908 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 25175578 ~ 25175990 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1200788 | False | 249 | lncRNA | 0.49 | 1 | 25175578 | 25175826 |
| TU1200789 | True | 413 | lncRNA | 0.44 | 1 | 25175578 | 25175990 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536826 | LOC106568076 | coding | downstream | 24179 | 25147189 ~ 25151399 (-) |
| LOC110537246 | LOC106568078 | coding | downstream | 33181 | 25036828 ~ 25142397 (-) |
| LOC110537244 | LOC106568079 | coding | downstream | 196621 | 24751606 ~ 24978957 (-) |
| LOC110537242 | LOC106568081 | coding | downstream | 428579 | 24737872 ~ 24746999 (-) |
| LOC100301685 | rdh12 | coding | downstream | 438479 | 24734911 ~ 24737099 (-) |
| LOC110537255 | NA | coding | upstream | 116030 | 25292020 ~ 25292876 (-) |
| LOC110537253 | LOC106567760 | coding | upstream | 117414 | 25293404 ~ 25296817 (-) |
| LOC110537254 | LOC106567761 | coding | upstream | 121539 | 25297529 ~ 25300040 (-) |
| LOC110537261 | LOC106567765 | coding | upstream | 615374 | 25791364 ~ 25797619 (-) |
| LOC110536828 | LOC106568049 | coding | upstream | 666102 | 25842092 ~ 25854283 (-) |
| G1053906 | NA | non-coding | downstream | 369 | 25174982 ~ 25175209 (-) |
| G1053878 | NA | non-coding | downstream | 40327 | 25134802 ~ 25135251 (-) |
| G1053824 | NA | non-coding | downstream | 125727 | 25049453 ~ 25049851 (-) |
| G1053818 | NA | non-coding | downstream | 130434 | 25044872 ~ 25045144 (-) |
| G1053817 | NA | non-coding | downstream | 130932 | 25044185 ~ 25044646 (-) |
| G1053909 | NA | non-coding | upstream | 2840 | 25178830 ~ 25179239 (-) |
| G1053914 | NA | non-coding | upstream | 16817 | 25192807 ~ 25196054 (-) |
| G1053939 | lgals9 | non-coding | upstream | 62849 | 25238839 ~ 25248756 (-) |
| G1053947 | NA | non-coding | upstream | 74402 | 25250392 ~ 25250605 (-) |
| LOC118936414 | NA | other | downstream | 567758 | 24600309 ~ 24607820 (-) |
| G1052040 | acaca | other | downstream | 620578 | 24554697 ~ 24555000 (-) |
| G1050429 | NA | other | downstream | 1931308 | 23243637 ~ 23244270 (-) |
| G1049722 | NA | other | downstream | 2485981 | 22689161 ~ 22689597 (-) |
| LOC110536820 | LOC106603249 | other | downstream | 2533979 | 22607858 ~ 22654480 (-) |
| G1054211 | NA | other | upstream | 447889 | 25623879 ~ 25624637 (-) |
| G1054232 | NA | other | upstream | 481279 | 25657269 ~ 25659005 (-) |
| G1055010 | NA | other | upstream | 1804793 | 26980783 ~ 26982355 (-) |
| G1055199 | NA | other | upstream | 1969220 | 27145210 ~ 27145493 (-) |
| G1056225 | NA | other | upstream | 2802036 | 27978026 ~ 27978436 (-) |
