G1053012


Basic Information

Item Value
gene id G1053012
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 26113503 ~ 26116012 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1199811
TGTGCCAATAACAATTTGCTTGACCATAGCAGCTTTCTGTATCATATTTATTCTGGACCGTATCCATATTTTCAATGCACTAGCAActtctttaagaatcaatgggGAAAAAGTACAAAACACTCAAATAATTTCTTGTTACAGTGGAGACCATACAGAATTCCTGCTATTGTGGAGAAAATAGACCAAGAGTTATCAACTCTGACAAAGGAATCCACCAAGTCTGTCAAAACCAGTGCCTGTTCAAACTGTACATTTGTAAGAGGTGGAAAATAAATTAAATGAGTCAGCCATACTTTTGAGAAGAGAAAATTGGCTTTCACAAACACAGTTCTTTAACAAAAAGCAAAACAAGATGAAAAGTGGTAGCTACATATCATACCTACATAGCAAACTATTATTCAGTTTCACAATGGACATTGATCAGAGGAAACATCTTTCAATATTGGAGTTTCTTGTGATGCACATCTTCTAGGTATAAGCACATGAGCTAACATAACCAATTAGATGAAGTATGGATGACAAAATTCAATCAATTTGTTGTACCTGTAGAGTGTTACTACCACCTTCATAGGGCATTTCACAAGTCAACAGTTTAAGTTTCGCTGGATACTCTGTATTACTCTGTTTGGGAGCAGCTGTTAGACAATATCATCAAATTCACTTACTAATCTTCTTAAGCACAGCACGGTGCTGTCTCGACAGAGACTGGGCCTTGTTGTCAATGCTTAGTTGTATATTTGCATAGAGCCTACAGATCATATTAATGGCTGCCACTAAATAATGTTCCTCTGATATGGCCACAATGAAAACTGTGATATGCGGCATCAGAAGAAAAAGAGACCATAAACAGACACTTATGAACAGTTTCTGTCTGGGATTGTATAAACCTGCCTTTTCTTCAAGGCCATCTTTCCATATACACTGGCAACTTGTTCAAATGTATTTAAGAGGGAATAAGAGCAGATGAATACTGCAGACCAGGTTGGCACTGTTGCTGTGTTTGATGGTTGTCAGCCCATGTTTTTACGGTTCCCATAGCCTCTCTGATGTGTATCCTTCCAGTTGTCCCAGTCTCTAGCTTTCTGCAAGGCCTCCTCGTCATCATTTTCAACCcgcttctctttctcttcttgcTCTCGCTCTTCTCCATCAACGTCCTCAGTGCTGCGAGGGATCCCCTGGTCCGGCAGGGCATTTTTCTTCCTGTGCTGCTCATACCAGTCATCCACAGACATAGTAGGCAGGCTGGGATAGCCAGCCCCAAACACTTTGGCCTGAACAGCATCTTTGGTGAGAATGAAGGGTTTCATGGGAGGCCTTTTAGATTGTGATGGCTCTGCTGAACTCTGTTTTAGAACATCCATCCTGGTCAAAATCTCAATTTCCTGATCAATGCTCTCAATCTCCTCCAGGGATACAACAATCCATTTCCTCAAGTTGAGGAGGTAGAAGTCTCTAACTATCTCGTCATCTGCCTGCCCACTGTCCACTGCTGCCTTGATCTCTGATAGCTTGGCCTCTGTGTTCTTCCTCTGGGTGTATCTTTCTATCTTTGCCGCTCTTACTGTCGCCATTGCAATCAAGTCCGGAGGTTTGGGGGGCCCATTTGCAGATTCTTCTTCCAGTGTGCCAGCAGAGTTTTCATTGGTTTTGGGTAGTTCAAACTTTGATATGTTATACTCCTTACATCTTTTCAAGAAGTCCAAAAAGTAACATCTTGCTATCTGAACTTGCTCTAGTCGTTTTGCCAGGTTCACTTGCTTCATAGTAAGAGCCCCCAGGAGGACAGGCAACATCAGATACTTCAGATCTGTGGTTGCTACCTCCTCCAATTCTTC

Function

NR:

description
immunoglobulin-binding protein 1-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1199811 True 1841 lncRNA 0.42 5 26113503 26116012
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110537271 LOC106567773 coding upstream 15469 26076393 ~ 26098034 (+)
LOC110537270 LOC106567772 coding upstream 38643 26059352 ~ 26074860 (+)
rnf128a rn128 coding upstream 63147 26018984 ~ 26050356 (+)
LOC118937880 NA coding upstream 115249 25997178 ~ 25998254 (+)
npas2 LOC106567770 coding upstream 126952 25912064 ~ 25986551 (+)
LOC110537279 LOC106567780 coding downstream 231813 26347825 ~ 26416894 (+)
rxfp2l LOC106568031 coding downstream 534000 26650012 ~ 26675953 (+)
LOC110537286 LOC106567784 coding downstream 626013 26742025 ~ 26799313 (+)
eda2r LOC106567786 coding downstream 759465 26875477 ~ 26883887 (+)
las1l las1l coding downstream 840519 26956531 ~ 26962053 (+)
G1052984 cxb1 non-coding upstream 1853 26107672 ~ 26111650 (+)
G1053010 NA non-coding upstream 7850 26105344 ~ 26105653 (+)
G1052998 NA non-coding upstream 57076 26056081 ~ 26056427 (+)
G1052924 NA non-coding upstream 203963 25907339 ~ 25909540 (+)
G1052925 NA non-coding upstream 212723 25900084 ~ 25900780 (+)
G1053037 NA non-coding downstream 26335 26142347 ~ 26170808 (+)
G1053075 NA non-coding downstream 96855 26212867 ~ 26300831 (+)
G1053229 NA non-coding downstream 288635 26404647 ~ 26405171 (+)
G1053390 NA non-coding downstream 501896 26617908 ~ 26618285 (+)
G1053381 NA non-coding downstream 523693 26639705 ~ 26643269 (+)
G1052923 NA other upstream 208188 25902319 ~ 25905315 (+)
G1052922 LOC106567769 other upstream 213779 25897532 ~ 25899724 (+)
LOC110537260 LOC106567764 other upstream 279037 25796348 ~ 25836166 (+)
LOC110537258 msi2h other upstream 757495 25352530 ~ 25719607 (+)
G1051534 NA other upstream 1935569 24177430 ~ 24177934 (+)
G1055498 LOC106568053 other downstream 1445359 27561371 ~ 27562671 (+)
hmgn7 LOC106567806 other downstream 1453342 27569334 ~ 27572548 (+)
LOC110536832 LOC106567811 other downstream 1595407 27711313 ~ 27715011 (+)
LOC110537316 LOC106567813 other downstream 1618543 27724763 ~ 27737547 (+)
LOC110537321 LOC106567817 other downstream 1676265 27792240 ~ 27806808 (+)

Expression

G1053012 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 60.
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G1053012 Expression in each Bioproject

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G1053012 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network