Gene
RNA
| Item | Value |
|---|---|
| gene id | G1053037 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 26142347 ~ 26170808 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1199840 | True | 1319 | lncRNA | 0.34 | 3 | 26142347 | 26170808 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537271 | LOC106567773 | coding | upstream | 44313 | 26076393 ~ 26098034 (+) |
| LOC110537270 | LOC106567772 | coding | upstream | 67487 | 26059352 ~ 26074860 (+) |
| rnf128a | rn128 | coding | upstream | 91991 | 26018984 ~ 26050356 (+) |
| LOC118937880 | NA | coding | upstream | 144093 | 25997178 ~ 25998254 (+) |
| npas2 | LOC106567770 | coding | upstream | 155796 | 25912064 ~ 25986551 (+) |
| LOC110537279 | LOC106567780 | coding | downstream | 177017 | 26347825 ~ 26416894 (+) |
| rxfp2l | LOC106568031 | coding | downstream | 479204 | 26650012 ~ 26675953 (+) |
| LOC110537286 | LOC106567784 | coding | downstream | 571217 | 26742025 ~ 26799313 (+) |
| eda2r | LOC106567786 | coding | downstream | 704669 | 26875477 ~ 26883887 (+) |
| las1l | las1l | coding | downstream | 785723 | 26956531 ~ 26962053 (+) |
| G1053012 | NA | non-coding | upstream | 26335 | 26113503 ~ 26116012 (+) |
| G1052984 | cxb1 | non-coding | upstream | 30697 | 26107672 ~ 26111650 (+) |
| G1053010 | NA | non-coding | upstream | 36694 | 26105344 ~ 26105653 (+) |
| G1052998 | NA | non-coding | upstream | 85920 | 26056081 ~ 26056427 (+) |
| G1052924 | NA | non-coding | upstream | 232807 | 25907339 ~ 25909540 (+) |
| G1053075 | NA | non-coding | downstream | 42059 | 26212867 ~ 26300831 (+) |
| G1053229 | NA | non-coding | downstream | 233839 | 26404647 ~ 26405171 (+) |
| G1053390 | NA | non-coding | downstream | 447100 | 26617908 ~ 26618285 (+) |
| G1053381 | NA | non-coding | downstream | 468897 | 26639705 ~ 26643269 (+) |
| G1053421 | LOC106567782 | non-coding | downstream | 508617 | 26679425 ~ 26680644 (+) |
| G1052923 | NA | other | upstream | 237032 | 25902319 ~ 25905315 (+) |
| G1052922 | LOC106567769 | other | upstream | 242623 | 25897532 ~ 25899724 (+) |
| LOC110537260 | LOC106567764 | other | upstream | 307881 | 25796348 ~ 25836166 (+) |
| LOC110537258 | msi2h | other | upstream | 786339 | 25352530 ~ 25719607 (+) |
| G1051534 | NA | other | upstream | 1964413 | 24177430 ~ 24177934 (+) |
| G1055498 | LOC106568053 | other | downstream | 1390563 | 27561371 ~ 27562671 (+) |
| hmgn7 | LOC106567806 | other | downstream | 1398546 | 27569334 ~ 27572548 (+) |
| LOC110536832 | LOC106567811 | other | downstream | 1540611 | 27711313 ~ 27715011 (+) |
| LOC110537316 | LOC106567813 | other | downstream | 1563747 | 27724763 ~ 27737547 (+) |
| LOC110537321 | LOC106567817 | other | downstream | 1621469 | 27792240 ~ 27806808 (+) |
