Gene
RNA
| Item | Value |
|---|---|
| gene id | G1053462 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 26741323 ~ 26741554 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1200292 | True | 232 | lncRNA | 0.34 | 1 | 26741323 | 26741554 |
26,738,400
26,738,800
26,739,200
26,739,600
26,740,000
26,740,400
26,740,800
26,741,200
26,741,600
26,742,000
26,742,400
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rxfp2l | LOC106568031 | coding | upstream | 65370 | 26650012 ~ 26675953 (+) |
| LOC110537279 | LOC106567780 | coding | upstream | 324429 | 26347825 ~ 26416894 (+) |
| LOC110537271 | LOC106567773 | coding | upstream | 643289 | 26076393 ~ 26098034 (+) |
| LOC110537270 | LOC106567772 | coding | upstream | 666463 | 26059352 ~ 26074860 (+) |
| rnf128a | rn128 | coding | upstream | 690967 | 26018984 ~ 26050356 (+) |
| LOC110537286 | LOC106567784 | coding | downstream | 471 | 26742025 ~ 26799313 (+) |
| eda2r | LOC106567786 | coding | downstream | 133923 | 26875477 ~ 26883887 (+) |
| las1l | las1l | coding | downstream | 214977 | 26956531 ~ 26962053 (+) |
| LOC110537296 | LOC106567793 | coding | downstream | 227992 | 26969546 ~ 26973829 (+) |
| LOC110537297 | NA | coding | downstream | 236457 | 26978011 ~ 26980998 (+) |
| G1053447 | NA | non-coding | upstream | 8887 | 26718938 ~ 26732436 (+) |
| G1053421 | LOC106567782 | non-coding | upstream | 60679 | 26679425 ~ 26680644 (+) |
| G1053381 | NA | non-coding | upstream | 98054 | 26639705 ~ 26643269 (+) |
| G1053390 | NA | non-coding | upstream | 123038 | 26617908 ~ 26618285 (+) |
| G1053229 | NA | non-coding | upstream | 336152 | 26404647 ~ 26405171 (+) |
| G1053530 | NA | non-coding | downstream | 193133 | 26934687 ~ 26936238 (+) |
| G1053529 | NA | non-coding | downstream | 201391 | 26942945 ~ 26954875 (+) |
| G1055067 | NA | non-coding | downstream | 333154 | 27074708 ~ 27074926 (+) |
| G1055068 | NA | non-coding | downstream | 336284 | 27077838 ~ 27078150 (+) |
| G1055079 | NA | non-coding | downstream | 349130 | 27090684 ~ 27090955 (+) |
| G1052923 | NA | other | upstream | 836008 | 25902319 ~ 25905315 (+) |
| G1052922 | LOC106567769 | other | upstream | 841599 | 25897532 ~ 25899724 (+) |
| LOC110537260 | LOC106567764 | other | upstream | 906857 | 25796348 ~ 25836166 (+) |
| LOC110537258 | msi2h | other | upstream | 1385315 | 25352530 ~ 25719607 (+) |
| G1051534 | NA | other | upstream | 2563389 | 24177430 ~ 24177934 (+) |
| G1055498 | LOC106568053 | other | downstream | 819817 | 27561371 ~ 27562671 (+) |
| hmgn7 | LOC106567806 | other | downstream | 827800 | 27569334 ~ 27572548 (+) |
| LOC110536832 | LOC106567811 | other | downstream | 969865 | 27711313 ~ 27715011 (+) |
| LOC110537316 | LOC106567813 | other | downstream | 993001 | 27724763 ~ 27737547 (+) |
| LOC110537321 | LOC106567817 | other | downstream | 1050723 | 27792240 ~ 27806808 (+) |
