G1053529


Basic Information

Item Value
gene id G1053529
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 26942945 ~ 26954875 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1200364
aaacttttgactggtactgtagatataaatacataaataataaaAATCTTCAGgagccccccaaaaatgttttgctcTCGGGCCTATGCCATAGCGAACAGCTTGACACAATGAGAAGAACAGCGAGATAGTGAGAGTTCCGAGAAAAATAAACCATTCACTCCAGTCCCACAACTGGGCTTCCAGTCCCCAACTTTCAATTTATACTGATTAGCATTAGAAGAAAAGCACCACAAGAACATGTCATTTGCCACTGAGGAGGCAAAACCGTTAGCATGTTTCAGCAGAGCAAGCATTGTTCTTACCTGGTCGAAGAGTTGCTTTCCCGTTGTGTTGGGCTGGATGGCAAACTCCAACTCTGCATCCATCGTGGTAACTCGCACACTAAGTCTTCGGCATTTTCGCAGTTATCTGTCCTTAGTCACTGATGTCAGGAATTGGATGGTAGCAACAATGGAGTCAACAAAAACTTGTGTCCATTAGATAAAGTGCACAATCTGAAAATCGTCCGTCAAGTTCAGTTAAACTTTGATTTCAAACTTTTCAAACTGCTCGTATTTTCCTATTTTCTTTGTATCGCCTCAAAGTGGTGATCCAGAGCTTAATTTCCTGCTAACGGCACGGTGACTGAAAAACCACACCCAGCCCAAT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1200364 True 651 lncRNA 0.42 2 26942945 26954875

Neighbor

gene id symbol gene type direction distance location
eda2r LOC106567786 coding upstream 59058 26875477 ~ 26883887 (+)
LOC110537286 LOC106567784 coding upstream 143632 26742025 ~ 26799313 (+)
rxfp2l LOC106568031 coding upstream 266992 26650012 ~ 26675953 (+)
LOC110537279 LOC106567780 coding upstream 526051 26347825 ~ 26416894 (+)
LOC110537271 LOC106567773 coding upstream 844911 26076393 ~ 26098034 (+)
las1l las1l coding downstream 1656 26956531 ~ 26962053 (+)
LOC110537296 LOC106567793 coding downstream 14671 26969546 ~ 26973829 (+)
LOC110537297 NA coding downstream 23136 26978011 ~ 26980998 (+)
LOC110537298 LOC106567789 coding downstream 35428 26990303 ~ 26998408 (+)
arhgef9a LOC106567797 coding downstream 46537 27001412 ~ 27023468 (+)
G1053530 NA non-coding upstream 6707 26934687 ~ 26936238 (+)
G1053462 NA non-coding upstream 201391 26741323 ~ 26741554 (+)
G1053447 NA non-coding upstream 210509 26718938 ~ 26732436 (+)
G1053421 LOC106567782 non-coding upstream 262301 26679425 ~ 26680644 (+)
G1053381 NA non-coding upstream 299676 26639705 ~ 26643269 (+)
G1055067 NA non-coding downstream 119833 27074708 ~ 27074926 (+)
G1055068 NA non-coding downstream 122963 27077838 ~ 27078150 (+)
G1055079 NA non-coding downstream 135809 27090684 ~ 27090955 (+)
G1055082 NA non-coding downstream 138669 27093544 ~ 27093807 (+)
G1055091 NA non-coding downstream 152082 27106957 ~ 27107378 (+)
G1052923 NA other upstream 1037630 25902319 ~ 25905315 (+)
G1052922 LOC106567769 other upstream 1043221 25897532 ~ 25899724 (+)
LOC110537260 LOC106567764 other upstream 1108479 25796348 ~ 25836166 (+)
LOC110537258 msi2h other upstream 1586937 25352530 ~ 25719607 (+)
G1051534 NA other upstream 2765011 24177430 ~ 24177934 (+)
G1055498 LOC106568053 other downstream 606496 27561371 ~ 27562671 (+)
hmgn7 LOC106567806 other downstream 614479 27569334 ~ 27572548 (+)
LOC110536832 LOC106567811 other downstream 756544 27711313 ~ 27715011 (+)
LOC110537316 LOC106567813 other downstream 779680 27724763 ~ 27737547 (+)
LOC110537321 LOC106567817 other downstream 837402 27792240 ~ 27806808 (+)

Expression

G1053529 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.5.
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G1053529 Expression in each Bioproject

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G1053529 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 8.
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Co-expression Network