Gene
RNA
| Item | Value |
|---|---|
| gene id | G1056282 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 28035441 ~ 28035643 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1203392 | True | 203 | lncRNA | 0.34 | 1 | 28035441 | 28035643 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537325 | LOC106567818 | coding | upstream | 177222 | 27850253 ~ 27858219 (+) |
| LOC110537324 | LOC106567819 | coding | upstream | 185523 | 27834303 ~ 27849918 (+) |
| LOC110539135 | LOC106568036 | coding | upstream | 218739 | 27812785 ~ 27816702 (+) |
| LOC110537321 | LOC106567817 | coding | upstream | 228633 | 27792240 ~ 27806808 (+) |
| LOC110537320 | LOC106567815 | coding | upstream | 245282 | 27785883 ~ 27790159 (+) |
| ucp2b | ucp2b | coding | downstream | 3558 | 28039201 ~ 28042491 (+) |
| rab6a | rab6a | coding | downstream | 26597 | 28062240 ~ 28088391 (+) |
| LOC110537331 | LOC106567824 | coding | downstream | 54780 | 28090423 ~ 28117403 (+) |
| LOC110537332 | LOC106567825 | coding | downstream | 114279 | 28149922 ~ 28162034 (+) |
| LOC110537334 | LOC106567827 | coding | downstream | 140449 | 28176092 ~ 28178670 (+) |
| G1056232 | NA | non-coding | upstream | 51293 | 27983941 ~ 27984148 (+) |
| G1056204 | NA | non-coding | upstream | 65957 | 27969274 ~ 27969484 (+) |
| G1056203 | NA | non-coding | upstream | 69004 | 27966224 ~ 27966437 (+) |
| G1055638 | NA | non-coding | upstream | 140409 | 27853405 ~ 27895032 (+) |
| G1055590 | NA | non-coding | upstream | 181478 | 27773353 ~ 27853963 (+) |
| G1056284 | NA | non-coding | downstream | 1631 | 28037274 ~ 28037492 (+) |
| G1056285 | NA | non-coding | downstream | 2653 | 28038296 ~ 28038698 (+) |
| G1056302 | NA | non-coding | downstream | 32605 | 28068248 ~ 28068481 (+) |
| G1056299 | NA | non-coding | downstream | 93331 | 28128974 ~ 28146894 (+) |
| G1056357 | NA | non-coding | downstream | 156827 | 28192470 ~ 28192712 (+) |
| LOC110537316 | LOC106567813 | other | upstream | 297908 | 27724763 ~ 27737547 (+) |
| LOC110536832 | LOC106567811 | other | upstream | 323722 | 27711313 ~ 27715011 (+) |
| hmgn7 | LOC106567806 | other | upstream | 462896 | 27569334 ~ 27572548 (+) |
| G1055498 | LOC106568053 | other | upstream | 472770 | 27561371 ~ 27562671 (+) |
| G1056324 | NA | other | downstream | 76610 | 28112253 ~ 28157057 (+) |
| rnf214 | LOC106567832 | other | downstream | 190061 | 28222935 ~ 28230419 (+) |
| LOC110537361 | LOC106603379 | other | downstream | 848297 | 28828372 ~ 28894230 (+) |
| G1056845 | NA | other | downstream | 1060429 | 29096072 ~ 29097636 (+) |
| LOC110537386 | LOC106567871 | other | downstream | 1663145 | 29698677 ~ 29726867 (+) |
