G1056428


Basic Information

Item Value
gene id G1056428
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 28322073 ~ 28363893 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1203558
aaaattgtaTTTTGcctttatttaacaaggtaggccagttgagaacaagttctcatttacaactgcgacctggccaagataaagcaaagcagtatgacaaaaacaacaacacatgggataacaaacaaatagaaaaatctatgtacagtgtgtgcaaatgtagtaaggttagggaggtaaggcaatgaataggccatagtggcgaaataatttagcattaacactggagtgatagatgtacggatgatgatgtgcaagtagaaatactagggtgcaaaagagcaaaaaaagaaataa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1203558 True 297 lncRNA 0.36 2 28322073 28363893

Neighbor

gene id symbol gene type direction distance location
LOC110537343 mpzl2 coding upstream 29300 28276092 ~ 28292773 (+)
rnf214 LOC106567832 coding upstream 94771 28222935 ~ 28230419 (+)
LOC110537338 LOC106567831 coding upstream 107777 28201316 ~ 28214296 (+)
LOC110536835 NA coding upstream 126886 28191874 ~ 28195525 (+)
LOC110537336 LOC106567830 coding upstream 131887 28186375 ~ 28190186 (+)
LOC110539136 LOC106568056 coding downstream 80077 28443970 ~ 28445822 (+)
LOC110537347 LOC106567840 coding downstream 105730 28469623 ~ 28504197 (+)
om-ii om-ii coding downstream 168218 28532111 ~ 28534256 (+)
LOC101268925 acsl4 coding downstream 417937 28781830 ~ 28804078 (+)
LOC110537360 LOC106567847 coding downstream 450042 28813935 ~ 28827945 (+)
G1056404 NA non-coding upstream 49490 28271929 ~ 28272583 (+)
G1056370 LOC106567833 non-coding upstream 75341 28239412 ~ 28246732 (+)
G1056371 NA non-coding upstream 89469 28231788 ~ 28232604 (+)
G1056358 NA non-coding upstream 128964 28192842 ~ 28193109 (+)
G1056491 NA non-coding downstream 34823 28398716 ~ 28399094 (+)
G1056583 NA non-coding downstream 207277 28571170 ~ 28571402 (+)
G1056611 NA non-coding downstream 250986 28614879 ~ 28615104 (+)
G1056626 LOC100196400 non-coding downstream 270435 28634328 ~ 28635860 (+)
G1056627 NA non-coding downstream 273299 28637192 ~ 28637440 (+)
G1056324 NA other upstream 165016 28112253 ~ 28157057 (+)
LOC110537321 LOC106567817 other upstream 515469 27792240 ~ 27806808 (+)
LOC110537316 LOC106567813 other upstream 584540 27724763 ~ 27737547 (+)
LOC110536832 LOC106567811 other upstream 610354 27711313 ~ 27715011 (+)
LOC110537361 LOC106603379 other downstream 520047 28828372 ~ 28894230 (+)
G1056845 NA other downstream 732179 29096072 ~ 29097636 (+)
LOC110537386 LOC106567871 other downstream 1334895 29698677 ~ 29726867 (+)
G1057271 NA other downstream 1534303 29898196 ~ 29898475 (+)
LOC110537400 LOC106603592 other downstream 1704459 30067984 ~ 30071409 (+)

Expression


Co-expression Network