G1057277


Basic Information

Item Value
gene id G1057277
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 29906493 ~ 29906784 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1204523
CTTCTACTCTATGCTGATTTTAGAGAGTTGCCTCCAGAATTGAATATTTAAGTGTTTCTATTGTAACAATGTGAGACATTGAAACAATGGAATTACATACCTCAAACAACTGTCCATGACAATAAACCAAAAGGCATTGTTATATGTGATATATTCCAAGGGCCCTCTCTTTGGCAGGTAGATGTTTCAATGTCACTTTGCAATATTTGTTACAATTGTACTTTTTTACATTtgatgtgtatggatgtgtgtttgCCCTAGATGATCTGACCTTACTTACTTACCTTATTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1204523 True 292 lncRNA 0.34 1 29906493 29906784

Neighbor

gene id symbol gene type direction distance location
si:ch211-284e13.9 LOC106568059 coding upstream 3823 29894148 ~ 29902670 (+)
LOC110537395 LOC106567881 coding upstream 16233 29872511 ~ 29890260 (+)
LOC110537399 LOC106567880 coding upstream 40332 29862443 ~ 29866161 (+)
LOC110537391 LOC106567878 coding upstream 64722 29806210 ~ 29841771 (+)
LOC110537393 LOC106567882 coding downstream 9074 29915858 ~ 29938574 (+)
LOC118937657 LOC106567883 coding downstream 35425 29942209 ~ 29946744 (+)
LOC110537392 LOC106567885 coding downstream 64501 29971285 ~ 29988063 (+)
LOC110537400 LOC106603592 coding downstream 161200 30067984 ~ 30071409 (+)
LOC110537408 NA coding downstream 415868 30322652 ~ 30334053 (+)
G1057276 NA non-coding upstream 614 29905390 ~ 29905879 (+)
G1057275 NA non-coding upstream 1363 29904885 ~ 29905130 (+)
G1057270 NA non-coding upstream 8575 29897554 ~ 29897918 (+)
G1057269 NA non-coding upstream 10722 29895542 ~ 29895771 (+)
G1057135 NA non-coding upstream 13993 29892093 ~ 29892500 (+)
G1057278 NA non-coding downstream 263 29907047 ~ 29907257 (+)
G1057282 NA non-coding downstream 4366 29911150 ~ 29911493 (+)
G1058453 NA non-coding downstream 146392 30053176 ~ 30053406 (+)
G1058521 NA non-coding downstream 205288 30112072 ~ 30112288 (+)
G1058533 NA non-coding downstream 215763 30122547 ~ 30122817 (+)
G1057271 NA other upstream 8018 29898196 ~ 29898475 (+)
LOC110537386 LOC106567871 other upstream 184708 29698677 ~ 29726867 (+)
G1056845 NA other upstream 808857 29096072 ~ 29097636 (+)
LOC110537361 LOC106603379 other upstream 1012302 28828372 ~ 28894230 (+)
rnf214 LOC106567832 other upstream 1676074 28222935 ~ 28230419 (+)
G1058669 NA other downstream 350273 30257057 ~ 30257549 (+)
G1058787 LOC106567901 other downstream 609297 30516081 ~ 30516890 (+)
LOC110537434 NA other downstream 941754 30848508 ~ 30879117 (+)
G1059091 NA other downstream 1093443 31000227 ~ 31007066 (+)

Expression


Co-expression Network