G1058533


Basic Information

Item Value
gene id G1058533
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 30122547 ~ 30122817 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1206011
ATTCTAATGGACACATacgatgtgtgtaaaatacttttttgaaggttgtactgattatgatgagctaatgctaagctttttgccagctatgtgtgacgctatgtttgttgacatcatacaatgcattctggttgtcacgtaagcatctgtcagaccaaagatgttataacaaaacaAGGTGAAGGGATCTTTCACTCGACTGATTTATTTCACTCTACTGATTTATGCttccaagacaactgggaactctgaaaaatacaaggtaaaatca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1206011 True 271 lncRNA 0.36 1 30122547 30122817

Neighbor

gene id symbol gene type direction distance location
LOC110537400 LOC106603592 coding upstream 51138 30067984 ~ 30071409 (+)
LOC110537392 LOC106567885 coding upstream 134484 29971285 ~ 29988063 (+)
LOC118937657 LOC106567883 coding upstream 175803 29942209 ~ 29946744 (+)
LOC110537393 LOC106567882 coding upstream 183973 29915858 ~ 29938574 (+)
si:ch211-284e13.9 LOC106568059 coding upstream 219877 29894148 ~ 29902670 (+)
LOC110537408 NA coding downstream 199835 30322652 ~ 30334053 (+)
LOC110537409 LOC106567889 coding downstream 214410 30337227 ~ 30340791 (+)
LOC100335038 LOC100335038 coding downstream 280921 30403738 ~ 30417713 (+)
LOC110537413 LOC106567901 coding downstream 316002 30438819 ~ 30440450 (+)
LOC110537416 LOC106567897 coding downstream 329429 30452246 ~ 30455623 (+)
G1058521 NA non-coding upstream 10259 30112072 ~ 30112288 (+)
G1058453 NA non-coding upstream 69141 30053176 ~ 30053406 (+)
G1057282 NA non-coding upstream 211054 29911150 ~ 29911493 (+)
G1057278 NA non-coding upstream 215290 29907047 ~ 29907257 (+)
G1057277 NA non-coding upstream 215763 29906493 ~ 29906784 (+)
G1058538 NA non-coding downstream 2353 30125170 ~ 30125403 (+)
G1058555 NA non-coding downstream 17806 30140623 ~ 30140847 (+)
G1058562 NA non-coding downstream 22656 30145473 ~ 30148262 (+)
G1058572 NA non-coding downstream 31535 30154352 ~ 30154554 (+)
G1058588 NA non-coding downstream 47771 30170588 ~ 30170838 (+)
G1057271 NA other upstream 224072 29898196 ~ 29898475 (+)
LOC110537386 LOC106567871 other upstream 400762 29698677 ~ 29726867 (+)
G1056845 NA other upstream 1024911 29096072 ~ 29097636 (+)
LOC110537361 LOC106603379 other upstream 1228356 28828372 ~ 28894230 (+)
G1058669 NA other downstream 134240 30257057 ~ 30257549 (+)
G1058787 LOC106567901 other downstream 393264 30516081 ~ 30516890 (+)
LOC110537434 NA other downstream 725721 30848508 ~ 30879117 (+)
G1059091 NA other downstream 877410 31000227 ~ 31007066 (+)
G1059685 LOC106567926 other downstream 1084812 31207629 ~ 31209357 (+)

Expression


Co-expression Network