G1058555


Basic Information

Item Value
gene id G1058555
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 30140623 ~ 30140847 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1206033
gtatgtagcctcgctacttttaaagcctcgctactgtatatagcctgtctttttactgttgttttatttctttacttacctattgtccacctaataccttttttgcactattggttagagcctgtaagcaagcatttcactgttgtattcgacgcacgtgacaaataaacttcgatttgatttgatttgaatcctattgaaaatttgtgggcaaaactgaaaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1206033 True 225 lncRNA 0.36 1 30140623 30140847

Neighbor

gene id symbol gene type direction distance location
LOC110537400 LOC106603592 coding upstream 69214 30067984 ~ 30071409 (+)
LOC110537392 LOC106567885 coding upstream 152560 29971285 ~ 29988063 (+)
LOC118937657 LOC106567883 coding upstream 193879 29942209 ~ 29946744 (+)
LOC110537393 LOC106567882 coding upstream 202049 29915858 ~ 29938574 (+)
si:ch211-284e13.9 LOC106568059 coding upstream 237953 29894148 ~ 29902670 (+)
LOC110537408 NA coding downstream 181805 30322652 ~ 30334053 (+)
LOC110537409 LOC106567889 coding downstream 196380 30337227 ~ 30340791 (+)
LOC100335038 LOC100335038 coding downstream 262891 30403738 ~ 30417713 (+)
LOC110537413 LOC106567901 coding downstream 297972 30438819 ~ 30440450 (+)
LOC110537416 LOC106567897 coding downstream 311399 30452246 ~ 30455623 (+)
G1058538 NA non-coding upstream 15220 30125170 ~ 30125403 (+)
G1058533 NA non-coding upstream 17806 30122547 ~ 30122817 (+)
G1058521 NA non-coding upstream 28335 30112072 ~ 30112288 (+)
G1058453 NA non-coding upstream 87217 30053176 ~ 30053406 (+)
G1057282 NA non-coding upstream 229130 29911150 ~ 29911493 (+)
G1058562 NA non-coding downstream 4626 30145473 ~ 30148262 (+)
G1058572 NA non-coding downstream 13505 30154352 ~ 30154554 (+)
G1058588 NA non-coding downstream 29741 30170588 ~ 30170838 (+)
G1058594 NA non-coding downstream 33288 30174135 ~ 30174393 (+)
G1058611 NA non-coding downstream 51119 30191966 ~ 30192246 (+)
G1057271 NA other upstream 242148 29898196 ~ 29898475 (+)
LOC110537386 LOC106567871 other upstream 418838 29698677 ~ 29726867 (+)
G1056845 NA other upstream 1042987 29096072 ~ 29097636 (+)
LOC110537361 LOC106603379 other upstream 1246432 28828372 ~ 28894230 (+)
G1058669 NA other downstream 116210 30257057 ~ 30257549 (+)
G1058787 LOC106567901 other downstream 375234 30516081 ~ 30516890 (+)
LOC110537434 NA other downstream 707691 30848508 ~ 30879117 (+)
G1059091 NA other downstream 859380 31000227 ~ 31007066 (+)
G1059685 LOC106567926 other downstream 1066782 31207629 ~ 31209357 (+)

Expression


Co-expression Network