G1058588


Basic Information

Item Value
gene id G1058588
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 30170588 ~ 30170838 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1206068
ATACATTCCTATTCTTGTAACATTTCCCAGAGTGTATGATTAGACTTGTTGGGGGAGGATGTACAGTAAAGGAAGAGCACCATGTTAAAattaactgtatgtttgtttCAGATGGTGAAATTAGTGAATACCTTTTATGAATCCCTCATTTATAGCAGATATTTGCTCTGGTTCTCTCAGACTACATTATCTGGAATAGTTGTGGACTGAGATCTGGGTCTTTTGAAGGTAATATGGCCTACTTATAATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1206068 True 251 lncRNA 0.35 1 30170588 30170838

Neighbor

gene id symbol gene type direction distance location
LOC110537400 LOC106603592 coding upstream 99179 30067984 ~ 30071409 (+)
LOC110537392 LOC106567885 coding upstream 182525 29971285 ~ 29988063 (+)
LOC118937657 LOC106567883 coding upstream 223844 29942209 ~ 29946744 (+)
LOC110537393 LOC106567882 coding upstream 232014 29915858 ~ 29938574 (+)
si:ch211-284e13.9 LOC106568059 coding upstream 267918 29894148 ~ 29902670 (+)
LOC110537408 NA coding downstream 151814 30322652 ~ 30334053 (+)
LOC110537409 LOC106567889 coding downstream 166389 30337227 ~ 30340791 (+)
LOC100335038 LOC100335038 coding downstream 232900 30403738 ~ 30417713 (+)
LOC110537413 LOC106567901 coding downstream 267981 30438819 ~ 30440450 (+)
LOC110537416 LOC106567897 coding downstream 281408 30452246 ~ 30455623 (+)
G1058572 NA non-coding upstream 16034 30154352 ~ 30154554 (+)
G1058562 NA non-coding upstream 22326 30145473 ~ 30148262 (+)
G1058555 NA non-coding upstream 29741 30140623 ~ 30140847 (+)
G1058538 NA non-coding upstream 45185 30125170 ~ 30125403 (+)
G1058533 NA non-coding upstream 47771 30122547 ~ 30122817 (+)
G1058594 NA non-coding downstream 3297 30174135 ~ 30174393 (+)
G1058611 NA non-coding downstream 21128 30191966 ~ 30192246 (+)
G1058635 NA non-coding downstream 40798 30211636 ~ 30211970 (+)
G1058654 NA non-coding downstream 54484 30225322 ~ 30225631 (+)
G1058663 NA non-coding downstream 66519 30237357 ~ 30239517 (+)
G1057271 NA other upstream 272113 29898196 ~ 29898475 (+)
LOC110537386 LOC106567871 other upstream 448803 29698677 ~ 29726867 (+)
G1056845 NA other upstream 1072952 29096072 ~ 29097636 (+)
LOC110537361 LOC106603379 other upstream 1276397 28828372 ~ 28894230 (+)
G1058669 NA other downstream 86219 30257057 ~ 30257549 (+)
G1058787 LOC106567901 other downstream 345243 30516081 ~ 30516890 (+)
LOC110537434 NA other downstream 677700 30848508 ~ 30879117 (+)
G1059091 NA other downstream 829389 31000227 ~ 31007066 (+)
G1059685 LOC106567926 other downstream 1036791 31207629 ~ 31209357 (+)

Expression


Co-expression Network