G1058883


Basic Information

Item Value
gene id G1058883
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 30674054 ~ 30674342 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1206380
ttattttttattaacaacaaatcgatacataaagcacatgagggaacacaagcatacatagattacaaacaatggacaatcgagctagggggtacaatatcacattacaattacacaaggaccttaagggacatacatatacttacaattcgaacagctttttttttgtcagtagagcatttaaccgtcttaaaatacagttcaatttctttttgtagggtacgaaaatgtggttttctgtttgtaaatgtacatttgtgtatatgaaatttggccaaaagaataatga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1206380 True 289 lncRNA 0.31 1 30674054 30674342

Neighbor

gene id symbol gene type direction distance location
LOC110537424 LOC106567905 coding upstream 62645 30609035 ~ 30611409 (+)
LOC110536846 LOC106567904 coding upstream 70760 30602356 ~ 30603294 (+)
LOC110536845 LOC106568061 coding upstream 91377 30581313 ~ 30582677 (+)
LOC110537421 pedf coding upstream 141125 30527919 ~ 30532929 (+)
serpinf2 LOC106567902 coding upstream 146704 30522661 ~ 30527350 (+)
LOC110537427 LOC106567909 coding downstream 2276 30676618 ~ 30692318 (+)
LOC110537430 LOC106567913 coding downstream 43758 30718100 ~ 30729787 (+)
LOC110536847 LOC106567912 coding downstream 63887 30738229 ~ 30739712 (+)
LOC110537431 wrb coding downstream 99698 30774040 ~ 30788637 (+)
igsf5a igsf5 coding downstream 124557 30798899 ~ 30824358 (+)
G1058869 NA non-coding upstream 13360 30658879 ~ 30660694 (+)
G1058855 NA non-coding upstream 30909 30633186 ~ 30643145 (+)
G1058822 NA non-coding upstream 82250 30590922 ~ 30591804 (+)
G1058821 NA non-coding upstream 83258 30590114 ~ 30590796 (+)
G1058819 NA non-coding upstream 85928 30586147 ~ 30588126 (+)
G1058900 NA non-coding downstream 37491 30711833 ~ 30712152 (+)
G1058905 NA non-coding downstream 63314 30737656 ~ 30771920 (+)
G1059541 NA non-coding downstream 389840 31064182 ~ 31064633 (+)
G1059543 NA non-coding downstream 390364 31064706 ~ 31065014 (+)
G1059549 NA non-coding downstream 396795 31071137 ~ 31071507 (+)
G1058787 LOC106567901 other upstream 157164 30516081 ~ 30516890 (+)
G1058669 NA other upstream 416505 30257057 ~ 30257549 (+)
LOC110537400 LOC106603592 other upstream 602648 30067984 ~ 30071409 (+)
G1057271 NA other upstream 775579 29898196 ~ 29898475 (+)
LOC110537386 LOC106567871 other upstream 952269 29698677 ~ 29726867 (+)
LOC110537434 NA other downstream 174196 30848508 ~ 30879117 (+)
G1059091 NA other downstream 325885 31000227 ~ 31007066 (+)
G1059685 LOC106567926 other downstream 533287 31207629 ~ 31209357 (+)
G1060470 NA other downstream 1136720 31811062 ~ 31811347 (+)
G1062404 NA other downstream 2685392 33359734 ~ 33366249 (+)

Expression


Co-expression Network