Gene
RNA
| Item | Value |
|---|---|
| gene id | G1059505 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 31000157 ~ 31006587 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1207068 | True | 498 | lncRNA | 0.43 | 2 | 31000157 | 31006587 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537432 | NA | coding | downstream | 226280 | 30738076 ~ 30773877 (-) |
| mipepb | LOC106567911 | coding | downstream | 244717 | 30739765 ~ 30755440 (-) |
| LOC110537426 | NA | coding | downstream | 328032 | 30648676 ~ 30672125 (-) |
| LOC110537425 | LOC106567906 | coding | downstream | 362119 | 30633836 ~ 30638038 (-) |
| LOC110537422 | LOC106567903 | coding | downstream | 436402 | 30537787 ~ 30563755 (-) |
| LOC110537436 | tmprss2 | coding | upstream | 68274 | 31074861 ~ 31100847 (-) |
| mmp30 | LOC106567923 | coding | upstream | 107070 | 31113657 ~ 31122131 (-) |
| mmp | mmp | coding | upstream | 136488 | 31143075 ~ 31150780 (-) |
| LOC118937817 | NA | coding | upstream | 154025 | 31160612 ~ 31176005 (-) |
| LOC110537438 | LOC106567925 | coding | upstream | 178278 | 31184865 ~ 31200704 (-) |
| G1059388 | igsf5 | non-coding | downstream | 138720 | 30816971 ~ 30861437 (-) |
| G1059352 | NA | non-coding | downstream | 255351 | 30743829 ~ 30744806 (-) |
| G1059331 | NA | non-coding | downstream | 292374 | 30707570 ~ 30707783 (-) |
| G1059290 | NA | non-coding | downstream | 299651 | 30692953 ~ 30700506 (-) |
| G1059288 | NA | non-coding | downstream | 299759 | 30691067 ~ 30700398 (-) |
| G1059546 | NA | non-coding | upstream | 59881 | 31066468 ~ 31066694 (-) |
| G1059613 | NA | non-coding | upstream | 66905 | 31073492 ~ 31073754 (-) |
| G1060051 | NA | non-coding | upstream | 209528 | 31216115 ~ 31216331 (-) |
| G1060052 | NA | non-coding | upstream | 209923 | 31216510 ~ 31216837 (-) |
| G1060173 | NA | non-coding | upstream | 396113 | 31402700 ~ 31403048 (-) |
| LOC110537417 | rnasek | other | downstream | 547944 | 30447386 ~ 30452456 (-) |
| G1059183 | NA | other | downstream | 664901 | 30334827 ~ 30335256 (-) |
| LOC110537405 | NA | other | downstream | 1046503 | 29951555 ~ 29960420 (-) |
| G1059610 | NA | other | upstream | 60998 | 31067585 ~ 31070860 (-) |
| G1061331 | NA | other | upstream | 984623 | 31991210 ~ 31992555 (-) |
| G1062051 | NA | other | upstream | 2032898 | 33039485 ~ 33086066 (-) |
| G1062603 | NA | other | upstream | 2506338 | 33512925 ~ 33513375 (-) |
| med13a | med13 | other | upstream | 2511178 | 33419083 ~ 33532690 (-) |
