XLOC_002961



Basic Information


Item Value
gene id XLOC_002961
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 37865419 ~ 37889561 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00005775
ATTCTCCCTTTCCTTCCATCCTCCTCCTCAATCTTGCCCTCCTCCTTCTTGTCCATCATTGTCTCCTCCGTTTTCTTGCCCTCCTCCTTCTTGTCCATCATTGTCTCCTCCGTTTTCTCCTGCTCTTTCTTCCTTCTCCTTCTCCTCTTCTTCTCCTTCATCTCCTCTTTAATCttgccctcctcctcctcttgtTCTCCACAGTATGAAGTAGTTTTCTTCATTAATATTTCTCCTTGGCTGACATTTATCTCATCTTCCACACAAGGCTCTCTGTGTATCACGGGAGTCACTATGATTTGATGATGCTCAATCGTTGAGTTGCGCAGAAAGTCAtctgttaaaagagaaatgaagtggttacacattttacaaagtgATTTTCAACAAGATGTTAAAGTTTACAATTTATTAATAGCAGTATAGACTGATATGTTGATGTAAACATGTTCATTTACCATCAGCGCCTTTGGGTGGAGAGATTGGGAGATCTATttgctcttcctcctcctcttcattctCCAGCTCGATTTCTTTATTAGGGGTGAGGCAGGAGATTGTCAGGTGTTTCCTGCAAGATCTGAGGAATGATGCCAGCCGGCTCTTTTTTCTCTTCCTCTCTTTCACCTCCTCGtctgttaaaagagaaatgattgTAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00005775 True 659 lncRNA 0.42 2 37865419 37889561

Neighbor


gene id symbol gene type direction distance location
XLOC_002959 si:dkey-65j4.2 coding downstream 377698 37485403 ~ 37487721 (-)
XLOC_002958 NA coding downstream 389174 37418234 ~ 37476245 (-)
XLOC_002957 CT573231.1 coding downstream 508116 37352480 ~ 37357303 (-)
XLOC_002956 omga coding downstream 527840 37334270 ~ 37337579 (-)
XLOC_002955 BX323076.2 coding downstream 823187 37041078 ~ 37042232 (-)
XLOC_002962 NA coding upstream 139799 38029360 ~ 38168078 (-)
XLOC_002963 dre-let-7c-2 coding upstream 182516 38072077 ~ 38072168 (-)
XLOC_002964 usp25 coding upstream 278597 38168158 ~ 38243851 (-)
XLOC_002965 nrip1b coding upstream 366995 38256556 ~ 38316161 (-)
XLOC_002966 CU914142.1 coding upstream 486573 38376134 ~ 38376253 (-)
XLOC_002945 AL845435.1 non-coding downstream 1202808 36654197 ~ 36662611 (-)
XLOC_002944 NA non-coding downstream 1214515 36642166 ~ 36650904 (-)
XLOC_002967 NA non-coding upstream 523369 38412930 ~ 38498072 (-)
XLOC_002968 BX000451.3 non-coding upstream 544822 38434383 ~ 38434499 (-)

Expression



Co-expression Network