G1059543


Basic Information

Item Value
gene id G1059543
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 31064706 ~ 31065014 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1207107
gtggcgtacagcaggtcagccaccagtcAGCCACTCGTCGAGGCCTGGTAACAGATTGAGTATAAATAATGAGGCGgtggctccatctgctggacgtactaggtctcgacgggctctccggacaggactaattggggctgattgggagctggtgagtaatcaagggcggattgctcaccagctgtgcgAGGCCCATAAAactgccagaagggcagcacacaaGGAGGACTAGGGGAAGTGAGGTGACTTCCAGGTGGTTGGATACGGTTACCCGAGGGAGTTGAGTTTGTGTACCCGACAGGATACAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1207107 True 309 lncRNA 0.56 1 31064706 31065014

Neighbor

gene id symbol gene type direction distance location
LOC110537434 NA coding upstream 185589 30848508 ~ 30879117 (+)
igsf5a igsf5 coding upstream 240348 30798899 ~ 30824358 (+)
LOC110537431 wrb coding upstream 276069 30774040 ~ 30788637 (+)
LOC110536847 LOC106567912 coding upstream 324994 30738229 ~ 30739712 (+)
LOC110537430 LOC106567913 coding upstream 334919 30718100 ~ 30729787 (+)
LOC110537442 LOC106567929 coding downstream 181273 31246287 ~ 31303725 (+)
LOC110537444 NA coding downstream 312853 31377867 ~ 31379355 (+)
LOC110537445 LOC106567930 coding downstream 348949 31413963 ~ 31472999 (+)
LOC110537446 LOC106568062 coding downstream 423434 31488448 ~ 31493095 (+)
LOC110537448 LOC106567933 coding downstream 428543 31493557 ~ 31542108 (+)
G1059541 NA non-coding upstream 73 31064182 ~ 31064633 (+)
G1058905 NA non-coding upstream 292786 30737656 ~ 30771920 (+)
G1058900 NA non-coding upstream 352554 30711833 ~ 30712152 (+)
G1058883 NA non-coding upstream 390364 30674054 ~ 30674342 (+)
G1058869 NA non-coding upstream 404012 30658879 ~ 30660694 (+)
G1059549 NA non-coding downstream 6123 31071137 ~ 31071507 (+)
G1059552 NA non-coding downstream 9435 31074449 ~ 31074779 (+)
G1059555 NA non-coding downstream 10664 31075678 ~ 31107101 (+)
G1059656 NA non-coding downstream 94544 31159558 ~ 31169891 (+)
G1059662 NA non-coding downstream 104439 31169453 ~ 31215394 (+)
G1059091 NA other upstream 57640 31000227 ~ 31007066 (+)
G1058787 LOC106567901 other upstream 547816 30516081 ~ 30516890 (+)
G1058669 NA other upstream 807157 30257057 ~ 30257549 (+)
LOC110537400 LOC106603592 other upstream 993300 30067984 ~ 30071409 (+)
G1059685 LOC106567926 other downstream 142615 31207629 ~ 31209357 (+)
G1060470 NA other downstream 746048 31811062 ~ 31811347 (+)
G1062404 NA other downstream 2294720 33359734 ~ 33366249 (+)
G1062537 NA other downstream 2443305 33508319 ~ 33508863 (+)
G1062648 NA other downstream 2593264 33658278 ~ 33661949 (+)

Expression


Co-expression Network