Gene
RNA
| Item | Value |
|---|---|
| gene id | G1059546 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 31066468 ~ 31066694 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: ryanodine receptor 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1207110 | True | 227 | lncRNA | 0.57 | 1 | 31066468 | 31066694 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537435 | dscam | coding | downstream | 34680 | 30895062 ~ 31031788 (-) |
| LOC110537432 | NA | coding | downstream | 292591 | 30738076 ~ 30773877 (-) |
| mipepb | LOC106567911 | coding | downstream | 311028 | 30739765 ~ 30755440 (-) |
| LOC110537426 | NA | coding | downstream | 394343 | 30648676 ~ 30672125 (-) |
| LOC110537425 | LOC106567906 | coding | downstream | 428430 | 30633836 ~ 30638038 (-) |
| LOC110537436 | tmprss2 | coding | upstream | 8167 | 31074861 ~ 31100847 (-) |
| mmp30 | LOC106567923 | coding | upstream | 46963 | 31113657 ~ 31122131 (-) |
| mmp | mmp | coding | upstream | 76381 | 31143075 ~ 31150780 (-) |
| LOC118937817 | NA | coding | upstream | 93918 | 31160612 ~ 31176005 (-) |
| LOC110537438 | LOC106567925 | coding | upstream | 118171 | 31184865 ~ 31200704 (-) |
| G1059505 | NA | non-coding | downstream | 59881 | 31000157 ~ 31006587 (-) |
| G1059388 | igsf5 | non-coding | downstream | 205031 | 30816971 ~ 30861437 (-) |
| G1059352 | NA | non-coding | downstream | 321662 | 30743829 ~ 30744806 (-) |
| G1059331 | NA | non-coding | downstream | 358685 | 30707570 ~ 30707783 (-) |
| G1059290 | NA | non-coding | downstream | 365962 | 30692953 ~ 30700506 (-) |
| G1059613 | NA | non-coding | upstream | 6798 | 31073492 ~ 31073754 (-) |
| G1060051 | NA | non-coding | upstream | 149421 | 31216115 ~ 31216331 (-) |
| G1060052 | NA | non-coding | upstream | 149816 | 31216510 ~ 31216837 (-) |
| G1060173 | NA | non-coding | upstream | 336006 | 31402700 ~ 31403048 (-) |
| G1060181 | NA | non-coding | upstream | 346588 | 31413282 ~ 31413519 (-) |
| LOC110537417 | rnasek | other | downstream | 614255 | 30447386 ~ 30452456 (-) |
| G1059183 | NA | other | downstream | 731212 | 30334827 ~ 30335256 (-) |
| LOC110537405 | NA | other | downstream | 1112814 | 29951555 ~ 29960420 (-) |
| G1059610 | NA | other | upstream | 891 | 31067585 ~ 31070860 (-) |
| G1061331 | NA | other | upstream | 924516 | 31991210 ~ 31992555 (-) |
| G1062051 | NA | other | upstream | 1972791 | 33039485 ~ 33086066 (-) |
| G1062603 | NA | other | upstream | 2446231 | 33512925 ~ 33513375 (-) |
| med13a | med13 | other | upstream | 2451071 | 33419083 ~ 33532690 (-) |
