G1059555


Basic Information

Item Value
gene id G1059555
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 31075678 ~ 31107101 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1207122
CAAAATATTTTAAGTGTGAATCTGACCTGACATGAGTCCACTCCTCCTGCCAGTGTCCCAGCACAGATCATAGAGGTGGTGACACGTCCATTGTACACCAACTGTGCGTTACATGTGTGTCTGCTGTACATGGTGATCCGGGCCTGACGCAGGTTTTCTGACACCAACCCTGGAGTCATCGCAATGATTGTCAAGCATAAAGATTAAATACAACAAATAGATTTTATTCTGATGACCTGTGTTTAATAATGACAGTCATTGGTCCTGTAATAAAAGTTGTCTTGCCACCACTCCTAATGGACCCCCATCCAGAGATCCAGGCTTCTCGCTGGGGAGTCAGATTCACTCCGAAGTTGGGCAGACACACTGGTCTCACCttatctacaacacaaaacatTTAAGACTGGCTTGGAGTGTTGTACTCCAATATGATTTCCAAAACATTgacacattaaaaaaatatataatattaacCGTGTTAGGGCTCCTTCACAACATTGAAAAGGTTGAATGCAACTTTACTATGCATGTGTATCAATTCACATCATACTGTTATTTTTCCAAACCCCCAATGTAATTTTCCATTGGAACATGTGTTTCAAATTTTTGAAATCGACCAGTGACTTACCTGACATAGTGAGGGGTGTGTTGAGTTTCATAAGAGCGATGTCATtatccttagtctgcttgtcgtATTTTTCGTGAGAGATGATGCGTCTCACTGAATTGCCAGTGGCATAAGCCATCTGTATCTGGATCAAATAGCCCGCATACACCGTccactgactgggctgtgatAGCCTACCATACAAAATGACAGAGGGGTTGATCCATATGATTTCAATAACTTTCTGACTGCGCCCCTTTTAACAAAACATTTACCAATGGttgaagtggtcagaaagtgactttttggacctaAATGTCAACATATTCAGGAGATAGAGGTTTTCATCAGTGAAAAAAATGTATTGGGTGTGATAACATTTGAAAGCGTACatacagggttgtcaaactattttttTACCTTTTAACATTATCTAATGCGTAAActcccaccctgtattcaagagtatGCTATGTCTCAACCGATGAACTAATTAaaatagggtctaagctacaacattTGTGAAAATGTGTATTTAACTTAAACGTATTTAAATAATTGACGTTAAAGGCTAGACATttattttttagtttttttttcaaGAAATCAGAATAGTTGGACAAACCTGTTTGTAAGTTAAATTATAAAAAAatgtcttcacattttcaaacagtacatttatattatCAAACGAGGCTACACATTTGGGTGACTTTTTTTCCCCTTGCATGAATAACCTCGTTTGACAGCCAAAAATAAAGTAAACCTGTCACGAACATTGGTTGAATTAATGGACCAAGGCTCAGCGAGCACAGATTTCCACATGTTAATTTGATGAAACTCACAGAAAACAATAAAGCTCAAAAACAAAACGTGAAGACAATGTAATGCTtgcaggcaactatacatagacaagatcccacaaaaatccagtgggaaaaggctgcctaaatatgatccccaatcagagacaacgatagacagctgcctctgattgggaaccataccaggccaaaacagAAATGAAAAAACTagactacccaccctagtcacaccctgacctaaccaaaatagagaataaaaaggatctctaatgtcagggtgtgacaaaaccatctagtgttcagcaaaataacaacacaatgtcaaataattaacatccaatcatatTAACCGTTACTCTGTcatgggaattccactaacggtccatatgtagccaaacgtagctgcacAGTAAAAATTGAAGTGTTAATTTAACTCCTATAGAGTTTAATTCAACACTGTTTCAGATAACAATTGGTCCCGGTCTACATAGTGTTAAAGTTACTCTACAGGTAGTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1207122 True 1947 lncRNA 0.38 2 31075678 31107101

Neighbor

gene id symbol gene type direction distance location
LOC110537434 NA coding upstream 196561 30848508 ~ 30879117 (+)
igsf5a igsf5 coding upstream 251320 30798899 ~ 30824358 (+)
LOC110537431 wrb coding upstream 287041 30774040 ~ 30788637 (+)
LOC110536847 LOC106567912 coding upstream 335966 30738229 ~ 30739712 (+)
LOC110537430 LOC106567913 coding upstream 345891 30718100 ~ 30729787 (+)
LOC110537442 LOC106567929 coding downstream 139186 31246287 ~ 31303725 (+)
LOC110537444 NA coding downstream 270766 31377867 ~ 31379355 (+)
LOC110537445 LOC106567930 coding downstream 306862 31413963 ~ 31472999 (+)
LOC110537446 LOC106568062 coding downstream 381347 31488448 ~ 31493095 (+)
LOC110537448 LOC106567933 coding downstream 386456 31493557 ~ 31542108 (+)
G1059552 NA non-coding upstream 899 31074449 ~ 31074779 (+)
G1059549 NA non-coding upstream 4171 31071137 ~ 31071507 (+)
G1059543 NA non-coding upstream 10664 31064706 ~ 31065014 (+)
G1059541 NA non-coding upstream 11045 31064182 ~ 31064633 (+)
G1058905 NA non-coding upstream 303758 30737656 ~ 30771920 (+)
G1059656 NA non-coding downstream 52457 31159558 ~ 31169891 (+)
G1059662 NA non-coding downstream 62352 31169453 ~ 31215394 (+)
G1059694 NA non-coding downstream 110911 31218012 ~ 31218282 (+)
G1059699 NA non-coding downstream 118961 31226062 ~ 31226335 (+)
G1059700 NA non-coding downstream 119352 31226453 ~ 31226845 (+)
G1059091 NA other upstream 68612 31000227 ~ 31007066 (+)
G1058787 LOC106567901 other upstream 558788 30516081 ~ 30516890 (+)
G1058669 NA other upstream 818129 30257057 ~ 30257549 (+)
LOC110537400 LOC106603592 other upstream 1004272 30067984 ~ 30071409 (+)
G1059685 LOC106567926 other downstream 100528 31207629 ~ 31209357 (+)
G1060470 NA other downstream 703961 31811062 ~ 31811347 (+)
G1062404 NA other downstream 2252633 33359734 ~ 33366249 (+)
G1062537 NA other downstream 2401218 33508319 ~ 33508863 (+)
G1062648 NA other downstream 2551177 33658278 ~ 33661949 (+)

Expression


Co-expression Network