G1059685 (LOC106567926)


Basic Information

Item Value
gene id G1059685
gene name LOC106567926
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 31207629 ~ 31209357 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1207289
TTGCATCCATTTTATTCAAAATACATGTCTCTGTTTCAGTCATTAACAATAGTTGACAGACTTCatatacacaacacaatatatGTCCAAGGCAATACTGTAGAAAATGTTGCAAAAACATATTTCTAATgttattaaaaacattttttgtcaAGTAATCAAAAGGTATTATCTGCCAGCAGAAATTGTTGTACTGTTTAACAATATGAGGCCCTCTAAAACAGTTTATTACATTATAAGTCTGATGGACATTAATGCATCATAACACTGTATGAGTTGTCATTATTTAGTTCAGTTGAATTCGTTAAAAAATAGAAAAGGGATTGAAAACTACAAAACAAGTTCAGGTAATCATTTCTGACTTTGTCCTTGTAAATCATCACACGTCGTCATGTTATCAAGATGGTTAGTTCAGTTGCCAGCATCATTTATTAGCCCATGGCCACTGTTCTACACTGGTATTTTATTGCACACTCCCTTGAAGCAGTGGAACAAAAGCTATATTTTGAAATTGAGTGCAACCCTTGATGATGATGCACAAATCTGAGGACTGAATTTTGAAATATAGTGTAATTACTGTATAAGCTGATTTCACTGTGAGGCTCTCACTGCTTCTCCACCTTCTTCATTTTGACCAACCTGTTAAGGCCGGCAGACTCATAAAACAATTCCTATGACATCACAGGTCAATTCCTCCCCCCTTGTTGACTGTCCTCCTATCTGGGCAGGAGGTGGAGAATGTTGCTGGGCAGAGACACCACCCCTGAGTTAGACAGGTTGAGCTCCTGTAAGGCAGCCAGTCCGCTAAACACCTCAGGGTTAAGTGGTCTCAGCCTGCTGTTGTTAGACAGGTCCACATTGAGAGGTCCTGCACCGTGGCCCTTGTTGGAAAAGACCTCCAGGTTGACCTCCTGGAGCCTGTTGCCGCTCAGGTCCACCTCGGCCAGGGGCAAGCCAGAGAAGCAGCCGGGGGCCAGCTCCTCCAGGGTGTTGTGGCTCAGGTCCAAGGTCTCCAGGTAGCGCAGCCTGGAGAAGATGCTGCTGTTGAGCCTGGAGAGGAGGTTGTTGCTAAGGTCCAGGCTGGCCAGCGTGGTGTAGCCCGGCCCAGACAGCATGGAGTCAGCGATGGtgtggatggagctggaggacagGTCCAGGGAGGAGGTGTCCagggggatggagatggggacCACCAGGCCATGACCACGGCCCACCCCACTACAGTCAACCCGGGTCAGGCTGAAGCTGTGGAACAGGCCGAAGCTCTCGACTTCACAGCGACAACCCGGGTGGCAGTCCATCACTGCAGCCACATAGTGAAGGACAAGCAAGAACCAAACACTCACACCCAGGAAACTGGACATAGCA

Function

NR:

description
tsukushin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1207289 True 1368 TUCP 0.47 3 31207629 31209357

Neighbor

gene id symbol gene type direction distance location
LOC110537434 NA coding upstream 328512 30848508 ~ 30879117 (+)
igsf5a igsf5 coding upstream 383271 30798899 ~ 30824358 (+)
LOC110537431 wrb coding upstream 418992 30774040 ~ 30788637 (+)
LOC110536847 LOC106567912 coding upstream 467917 30738229 ~ 30739712 (+)
LOC110537430 LOC106567913 coding upstream 477842 30718100 ~ 30729787 (+)
LOC110537442 LOC106567929 coding downstream 36930 31246287 ~ 31303725 (+)
LOC110537444 NA coding downstream 168510 31377867 ~ 31379355 (+)
LOC110537445 LOC106567930 coding downstream 204606 31413963 ~ 31472999 (+)
LOC110537446 LOC106568062 coding downstream 279091 31488448 ~ 31493095 (+)
LOC110537448 LOC106567933 coding downstream 284200 31493557 ~ 31542108 (+)
G1059656 NA non-coding upstream 37738 31159558 ~ 31169891 (+)
G1059555 NA non-coding upstream 100528 31075678 ~ 31107101 (+)
G1059552 NA non-coding upstream 132850 31074449 ~ 31074779 (+)
G1059549 NA non-coding upstream 136122 31071137 ~ 31071507 (+)
G1059543 NA non-coding upstream 142615 31064706 ~ 31065014 (+)
G1059694 NA non-coding downstream 8655 31218012 ~ 31218282 (+)
G1059699 NA non-coding downstream 16705 31226062 ~ 31226335 (+)
G1059700 NA non-coding downstream 17096 31226453 ~ 31226845 (+)
G1059701 NA non-coding downstream 17794 31227151 ~ 31227481 (+)
G1059704 LOC106567928 non-coding downstream 23036 31232393 ~ 31233012 (+)
G1059091 NA other upstream 200563 31000227 ~ 31007066 (+)
G1058787 LOC106567901 other upstream 690739 30516081 ~ 30516890 (+)
G1058669 NA other upstream 950080 30257057 ~ 30257549 (+)
LOC110537400 LOC106603592 other upstream 1136223 30067984 ~ 30071409 (+)
G1060470 NA other downstream 601705 31811062 ~ 31811347 (+)
G1062404 NA other downstream 2150377 33359734 ~ 33366249 (+)
G1062537 NA other downstream 2298962 33508319 ~ 33508863 (+)
G1062648 NA other downstream 2448921 33658278 ~ 33661949 (+)
ubb ubb other downstream 3557667 34766968 ~ 34770882 (+)

Expression


Co-expression Network