Gene
RNA
| Item | Value |
|---|---|
| gene id | G1060051 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 31216115 ~ 31216331 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1207683 | True | 217 | lncRNA | 0.40 | 1 | 31216115 | 31216331 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537440 | LOC106567926 | coding | downstream | 616 | 31206763 ~ 31215499 (-) |
| LOC110537438 | LOC106567925 | coding | downstream | 15411 | 31184865 ~ 31200704 (-) |
| LOC118937817 | NA | coding | downstream | 40110 | 31160612 ~ 31176005 (-) |
| mmp | mmp | coding | downstream | 65335 | 31143075 ~ 31150780 (-) |
| mmp30 | LOC106567923 | coding | downstream | 93984 | 31113657 ~ 31122131 (-) |
| LOC110537441 | LOC106567928 | coding | upstream | 13216 | 31229547 ~ 31235038 (-) |
| LOC110537443 | LOC106603553 | coding | upstream | 88592 | 31304923 ~ 31333428 (-) |
| LOC110536848 | LOC106568063 | coding | upstream | 496917 | 31713248 ~ 31738374 (-) |
| LOC110539140 | LOC106567939 | coding | upstream | 621555 | 31837886 ~ 31840018 (-) |
| LOC110537451 | NA | coding | upstream | 681279 | 31897610 ~ 31900587 (-) |
| G1059613 | NA | non-coding | downstream | 142361 | 31073492 ~ 31073754 (-) |
| G1059546 | NA | non-coding | downstream | 149421 | 31066468 ~ 31066694 (-) |
| G1059505 | NA | non-coding | downstream | 209528 | 31000157 ~ 31006587 (-) |
| G1059388 | igsf5 | non-coding | downstream | 354678 | 30816971 ~ 30861437 (-) |
| G1059352 | NA | non-coding | downstream | 471309 | 30743829 ~ 30744806 (-) |
| G1060052 | NA | non-coding | upstream | 179 | 31216510 ~ 31216837 (-) |
| G1060173 | NA | non-coding | upstream | 186369 | 31402700 ~ 31403048 (-) |
| G1060181 | NA | non-coding | upstream | 196951 | 31413282 ~ 31413519 (-) |
| G1060182 | NA | non-coding | upstream | 197695 | 31414026 ~ 31414242 (-) |
| G1060183 | NA | non-coding | upstream | 198637 | 31414968 ~ 31415269 (-) |
| G1059610 | NA | other | downstream | 145255 | 31067585 ~ 31070860 (-) |
| LOC110537432 | NA | other | downstream | 442308 | 30738076 ~ 30773877 (-) |
| LOC110537425 | LOC106567906 | other | downstream | 579393 | 30633836 ~ 30638038 (-) |
| LOC110537417 | rnasek | other | downstream | 763902 | 30447386 ~ 30452456 (-) |
| G1059183 | NA | other | downstream | 880859 | 30334827 ~ 30335256 (-) |
| G1061331 | NA | other | upstream | 774879 | 31991210 ~ 31992555 (-) |
| G1062051 | NA | other | upstream | 1823154 | 33039485 ~ 33086066 (-) |
| G1062603 | NA | other | upstream | 2296594 | 33512925 ~ 33513375 (-) |
| med13a | med13 | other | upstream | 2301434 | 33419083 ~ 33532690 (-) |
| LOC110537478 | NA | other | upstream | 2490141 | 33667535 ~ 33707659 (-) |
