G1059691


Basic Information

Item Value
gene id G1059691
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 31258724 ~ 31285759 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1207295
atgcgcaatgctaagcatcggctggagagctgtaaagctcgccactattgaatcaaatcaaatcaaatcaaatgtatttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacaagcaagcaatgcaggtgtagaagcacggtggctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgaggcgtggccagtcctcttctggctgtgccgggtggagattataacagaacatggccaagatgttcaaatgttcataaatgaccagcatggtcaaataataataatcacagtagttgtcgagggtgcaacaagtcagcacctcaggagtaaatgtcagttggcttttcatagccgatcattaagagtatttctaccgctcctgctgtctctagagagttgaaaacagcaggtctgggacaggtagcacatccggtgaacaggtcagggttccatagccgcaggcagaacagttgaaactggagcagcagcacggccagttggactggggacagcaaggagtcatcatgccaggtagtcctgaggcatggtcctagggctcaggtcctccgagagagaaagaaagaaagagagaaaaggagaattagagagagcacacttaaattcacacaggacaccggatataAACTCGGTTTAATAAGCTTTACTAATCGTCCGTGAGTTTTAATAGGTTAATTTAGAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1207295 True 764 lncRNA 0.46 2 31258724 31285759

Neighbor

gene id symbol gene type direction distance location
LOC110537434 NA coding upstream 379607 30848508 ~ 30879117 (+)
igsf5a igsf5 coding upstream 434366 30798899 ~ 30824358 (+)
LOC110537431 wrb coding upstream 470087 30774040 ~ 30788637 (+)
LOC110536847 LOC106567912 coding upstream 519012 30738229 ~ 30739712 (+)
LOC110537430 LOC106567913 coding upstream 528937 30718100 ~ 30729787 (+)
LOC110537444 NA coding downstream 92108 31377867 ~ 31379355 (+)
LOC110537445 LOC106567930 coding downstream 128204 31413963 ~ 31472999 (+)
LOC110537446 LOC106568062 coding downstream 202689 31488448 ~ 31493095 (+)
LOC110537448 LOC106567933 coding downstream 207798 31493557 ~ 31542108 (+)
LOC110537449 NA coding downstream 356035 31641794 ~ 31648451 (+)
G1059704 LOC106567928 non-coding upstream 25712 31232393 ~ 31233012 (+)
G1059701 NA non-coding upstream 31243 31227151 ~ 31227481 (+)
G1059700 NA non-coding upstream 31879 31226453 ~ 31226845 (+)
G1059699 NA non-coding upstream 32389 31226062 ~ 31226335 (+)
G1059694 NA non-coding upstream 40442 31218012 ~ 31218282 (+)
G1059753 NA non-coding downstream 56174 31341933 ~ 31342170 (+)
G1059778 NA non-coding downstream 111326 31397085 ~ 31397362 (+)
G1059799 NA non-coding downstream 112076 31397835 ~ 31398044 (+)
G1059802 NA non-coding downstream 114911 31400670 ~ 31400890 (+)
G1059685 LOC106567926 other upstream 49367 31207629 ~ 31209357 (+)
G1059091 NA other upstream 251658 31000227 ~ 31007066 (+)
G1058787 LOC106567901 other upstream 741834 30516081 ~ 30516890 (+)
G1058669 NA other upstream 1001175 30257057 ~ 30257549 (+)
G1060470 NA other downstream 525303 31811062 ~ 31811347 (+)
G1062404 NA other downstream 2073975 33359734 ~ 33366249 (+)
G1062537 NA other downstream 2222560 33508319 ~ 33508863 (+)
G1062648 NA other downstream 2372519 33658278 ~ 33661949 (+)
ubb ubb other downstream 3481265 34766968 ~ 34770882 (+)

Expression


Co-expression Network