G1059831


Basic Information

Item Value
gene id G1059831
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 31464774 ~ 31465108 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1207443
GATTATAGACAGCCTACTGTGCTGTTGTTGATCCTAGCTGCTTCATTACGCATATTAATAAATAGGTTAGACTGATTGCATCATCACTGACCTCCAGTCATTATGATGGGCTATACTGTCCTGTACCACGGTTAGTCTGCATCATCACTGACCTCCATAATTAAGGGATAAGGCTAAATCCTATCTGTCCTTTCGTTGCGACCCATATTATTTAGGTTAGACAGCATTATCTATGACCTTCATCAAAATCAAGGGCCTCATTGTAATCAAGAGGTTCACTATACTGACTCCTGTCGTTGTGACCCTGTATGTCGTCCATCCGGCGAGTCACACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1207443 True 335 lncRNA 0.43 1 31464774 31465108

Neighbor

gene id symbol gene type direction distance location
LOC110537444 NA coding upstream 85419 31377867 ~ 31379355 (+)
LOC110537442 LOC106567929 coding upstream 161049 31246287 ~ 31303725 (+)
LOC110537434 NA coding upstream 585657 30848508 ~ 30879117 (+)
igsf5a igsf5 coding upstream 640416 30798899 ~ 30824358 (+)
LOC110537431 wrb coding upstream 676137 30774040 ~ 30788637 (+)
LOC110537446 LOC106568062 coding downstream 23340 31488448 ~ 31493095 (+)
LOC110537448 LOC106567933 coding downstream 28449 31493557 ~ 31542108 (+)
LOC110537449 NA coding downstream 176686 31641794 ~ 31648451 (+)
LOC118937660 NA coding downstream 189505 31654613 ~ 31749798 (+)
LOC110537450 LOC106603546 coding downstream 399226 31864334 ~ 31889455 (+)
G1059829 NA non-coding upstream 4361 31460130 ~ 31460413 (+)
G1059823 NA non-coding upstream 11525 31452845 ~ 31453249 (+)
G1059822 NA non-coding upstream 12044 31449740 ~ 31452730 (+)
G1059821 NA non-coding upstream 17492 31446825 ~ 31447282 (+)
G1059820 NA non-coding upstream 18056 31446422 ~ 31446718 (+)
G1059863 NA non-coding downstream 85803 31550911 ~ 31551131 (+)
G1059872 NA non-coding downstream 95552 31560660 ~ 31561039 (+)
G1059874 NA non-coding downstream 96871 31561979 ~ 31563359 (+)
G1059883 NA non-coding downstream 111944 31577052 ~ 31577279 (+)
G1059887 NA non-coding downstream 117060 31582168 ~ 31582464 (+)
G1059685 LOC106567926 other upstream 255417 31207629 ~ 31209357 (+)
G1059091 NA other upstream 457708 31000227 ~ 31007066 (+)
G1058787 LOC106567901 other upstream 947884 30516081 ~ 30516890 (+)
G1058669 NA other upstream 1207225 30257057 ~ 30257549 (+)
G1060470 NA other downstream 345954 31811062 ~ 31811347 (+)
G1062404 NA other downstream 1894626 33359734 ~ 33366249 (+)
G1062537 NA other downstream 2043211 33508319 ~ 33508863 (+)
G1062648 NA other downstream 2193170 33658278 ~ 33661949 (+)
ubb ubb other downstream 3301916 34766968 ~ 34770882 (+)

Expression


Co-expression Network