G1059872


Basic Information

Item Value
gene id G1059872
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 31560660 ~ 31561039 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1207484
cgcaaggctgcaggcccagacggcatccccagccgcgccctcagagcatgcgtagaccagctggccggtgtgtttacggacatattcaatcaatccctataccagtctgctgttcccacatgcttcaagagggccaccattgttcctgttcccaagaaagctaaggtaactgagctaaacgactaccgccccttagcactcacatccgtcatcatgaagtgctttgagagactagtcaaggaccatatcacctccaccctacctgacaccctagacccactccaatttgcttaccgcccaaataggtccacagacgatgcaatctcaaccacactgcacactgccctaacccatctggacaagaggaatacctatgtgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1207484 True 380 lncRNA 0.53 1 31560660 31561039

Neighbor

gene id symbol gene type direction distance location
LOC110537448 LOC106567933 coding upstream 18552 31493557 ~ 31542108 (+)
LOC110537446 LOC106568062 coding upstream 67565 31488448 ~ 31493095 (+)
LOC110537445 LOC106567930 coding upstream 87661 31413963 ~ 31472999 (+)
LOC110537444 NA coding upstream 181305 31377867 ~ 31379355 (+)
LOC110537442 LOC106567929 coding upstream 256935 31246287 ~ 31303725 (+)
LOC110537449 NA coding downstream 80755 31641794 ~ 31648451 (+)
LOC118937660 NA coding downstream 93574 31654613 ~ 31749798 (+)
LOC110537450 LOC106603546 coding downstream 303295 31864334 ~ 31889455 (+)
LOC110537452 LOC106567936 coding downstream 344442 31905481 ~ 31916227 (+)
stt3a stt3a coding downstream 355996 31917035 ~ 31932638 (+)
G1059863 NA non-coding upstream 9529 31550911 ~ 31551131 (+)
G1059831 NA non-coding upstream 95552 31464774 ~ 31465108 (+)
G1059829 NA non-coding upstream 100247 31460130 ~ 31460413 (+)
G1059823 NA non-coding upstream 107411 31452845 ~ 31453249 (+)
G1059822 NA non-coding upstream 107930 31449740 ~ 31452730 (+)
G1059874 NA non-coding downstream 940 31561979 ~ 31563359 (+)
G1059883 NA non-coding downstream 16013 31577052 ~ 31577279 (+)
G1059887 NA non-coding downstream 21129 31582168 ~ 31582464 (+)
G1059893 NA non-coding downstream 29960 31590999 ~ 31591291 (+)
G1059895 NA non-coding downstream 31755 31592794 ~ 31663934 (+)
G1059685 LOC106567926 other upstream 351303 31207629 ~ 31209357 (+)
G1059091 NA other upstream 553594 31000227 ~ 31007066 (+)
LOC110537434 NA other upstream 681549 30848508 ~ 30879117 (+)
G1058787 LOC106567901 other upstream 1043770 30516081 ~ 30516890 (+)
G1058669 NA other upstream 1303111 30257057 ~ 30257549 (+)
G1060470 NA other downstream 250023 31811062 ~ 31811347 (+)
G1062404 NA other downstream 1798695 33359734 ~ 33366249 (+)
G1062537 NA other downstream 1947280 33508319 ~ 33508863 (+)
G1062648 NA other downstream 2097239 33658278 ~ 33661949 (+)
ubb ubb other downstream 3205985 34766968 ~ 34770882 (+)

Expression


Co-expression Network