G1060535


Basic Information

Item Value
gene id G1060535
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 31902373 ~ 31902596 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1208177
tgcaccccattatttttatttctactttgcacattcttccactgcaaatctaccattccagtgttttacttgctatattgtatttactttgccaccatggccttttttttgcctttacctcccttatctcacctcatttgttcacatcgtatatagacttgtttctactgttttattgactgtatgtttgttttactccatgtgtaactctgtgtcgttgtatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1208177 True 224 lncRNA 0.36 1 31902373 31902596

Neighbor

gene id symbol gene type direction distance location
LOC110537450 LOC106603546 coding upstream 12918 31864334 ~ 31889455 (+)
LOC118937660 NA coding upstream 238359 31654613 ~ 31749798 (+)
LOC110537449 NA coding upstream 253922 31641794 ~ 31648451 (+)
LOC110537448 LOC106567933 coding upstream 360265 31493557 ~ 31542108 (+)
LOC110537446 LOC106568062 coding upstream 409278 31488448 ~ 31493095 (+)
LOC110537452 LOC106567936 coding downstream 2885 31905481 ~ 31916227 (+)
stt3a stt3a coding downstream 14439 31917035 ~ 31932638 (+)
LOC110537455 LOC106567942 coding downstream 52677 31955273 ~ 31960916 (+)
LOC110537456 LOC105010978 coding downstream 59952 31961376 ~ 31968942 (+)
LOC110537454 LOC106567941 coding downstream 69305 31971901 ~ 31995685 (+)
G1060533 NA non-coding upstream 3649 31898521 ~ 31898724 (+)
G1060531 NA non-coding upstream 6962 31895157 ~ 31895411 (+)
G1060530 NA non-coding upstream 22062 31880000 ~ 31880311 (+)
G1060525 NA non-coding upstream 31249 31870874 ~ 31871124 (+)
G1060523 NA non-coding upstream 32874 31869213 ~ 31869499 (+)
G1060536 NA non-coding downstream 751 31903347 ~ 31904093 (+)
G1060555 NA non-coding downstream 76598 31979194 ~ 31979605 (+)
G1060602 NA non-coding downstream 158404 32061000 ~ 32080346 (+)
G1060718 NA non-coding downstream 401608 32304204 ~ 32321208 (+)
G1060470 NA other upstream 91026 31811062 ~ 31811347 (+)
G1059685 LOC106567926 other upstream 693016 31207629 ~ 31209357 (+)
G1059091 NA other upstream 895307 31000227 ~ 31007066 (+)
LOC110537434 NA other upstream 1023262 30848508 ~ 30879117 (+)
G1058787 LOC106567901 other upstream 1385483 30516081 ~ 30516890 (+)
G1062404 NA other downstream 1457138 33359734 ~ 33366249 (+)
G1062537 NA other downstream 1605723 33508319 ~ 33508863 (+)
G1062648 NA other downstream 1755682 33658278 ~ 33661949 (+)
ubb ubb other downstream 2864428 34766968 ~ 34770882 (+)
LOC110537506 LOC106567992 other downstream 3073696 34964222 ~ 34982028 (+)

Expression


Co-expression Network