G1061259


Basic Information

Item Value
gene id G1061259
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 31914166 ~ 31916223 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1208961
GTGTATACTGACCAATTTTATTTAGGCAATACTTTTACTCCAACCTCACAAATATCAATCTGCATACATAAACACTATGCACTTCTTACAATTACTACATACCGTTTGTTTCAAAAACACTTCCCCTTCCCCCGCAACCCATGAGATTAATGACTAGGTGAAAGCTAGATGATGATAATCCCCTTGGTGAGGTTTGGTTGAACATTAGAGCCAAGTGACATCATGTAAAACAAGAAGCCCCTACAGGCTGTTTGTATTTGCCACTGCTCATGGGGGAACATAAACACAGAGGGTTTCTCCCCTGTCTGTTACTTCAAGAGAAAATCTGTCAGAAGTTCAGCTCAGTGACATCTTCCTATTTCCTACACTATAGTCCTTGGTGTGCAATTGATTTGAAGCAGAAGTAAATCAAACAGAGTAGTAAAGAAGTTTGGCAGTTTCATCTGATCTGACccagcagcagacagacagcttCACCTGTCTGTCTAATGctgagtttacacaggcaacccaattctgatcttttttccactaattggtattttgcaGCCTACATGGATACAGGCCCATCTCCCATGCTGAAAGCGTAAAAATTAAGATTCCTCTAAATAAAGCCCTTATAGGAATAAAGTGTCCCTTTGTTTTTACCGCACAAGCTTATCCCTGGGGCAGAGGAGTAGCAGTGTCACTCTGGCTTTATAGCGAAACAGCTATTCATGAACAAGTCAGCATCCTATCAGGGTGAAAGGAATGTCACTTGCAACACAGAAAAAATTACACTTGTGCTTTACTTTTGAACATCGCACACGTCACCCCCTTCAATTGAAAAGCCGAACAGGCGTCTTTGGGTCACACAcattttctactgcttgagctcctgtttcTCTTGTAAAATATTATCTCAGatgtattgtggagctcctgcaccaaAACAGTACCATCACCCAAAATGAACACAGGCACGGCACGTATTTCAATCCAAGTCAATCATTGATAACATCAGTCCTGGCAAAAATGTAAcctttttccttttctcttcCACATCCAGTGTTTTATACAAATCAGTCTGGGATCAGTCACTGGGTTATAAACATATTAAACAAACAATAGGATAGCAAACATTGGAGTTGGAATTGAAAAGAGcaggaaaaaaaacaaacaatgtatatgacaGCTTGTGCTGTATTTAAAGCTCTCAAATGGCACATCatacataaaaaaaactattaaacaaaataaatgagaaaaatatataataacttgtgtgtttgagtgtgaggGACAGGGCAGTCAAATCTCATTCGTCATTCACATTAAAAACACACCTTGCAGGTGCTCCAAAATAATATGAAGGGCTGTGGTAGAATCATTAAAATCACATAAAACCCCCCCTTTAACCAAAGAAACATCATTCCTCTTCCTGTCCACAGAAAGAATCAACTGCTCCTCCATTTGTTTACTAAGCAGTTGCTGAGCTGCTCCTTTGTCGCCCCCTGGTGGCCATCACTGGGAGGGTAGGGGTCTCTGGCGGCCAGGTGAGACGTGGGGAGAGGGGGGCAGCTTCTCGGTGGAggtggacaaagtcaaggacgACTGTAGGTGGACCGTTTTGTGGAACAGCTTGTTGCTAATCAGCACAACCAGAGAGAAGAGGCGCAGCTGGAAG

Function

NR:

description
PREDICTED: etoposide-induced protein 2.4 homolog isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1208961 True 1666 lncRNA 0.42 2 31914166 31916223

Neighbor

gene id symbol gene type direction distance location
LOC110537451 NA coding downstream 13579 31897610 ~ 31900587 (-)
LOC110539140 LOC106567939 coding downstream 74148 31837886 ~ 31840018 (-)
LOC110536848 LOC106568063 coding downstream 175792 31713248 ~ 31738374 (-)
LOC110537443 LOC106603553 coding downstream 580738 31304923 ~ 31333428 (-)
LOC110537441 LOC106567928 coding downstream 679128 31229547 ~ 31235038 (-)
LOC118937661 LOC106567942 coding upstream 43404 31959627 ~ 31961527 (-)
LOC110537458 LOC106567946 coding upstream 221776 32137999 ~ 32300172 (-)
LOC110537459 LOC106567948 coding upstream 387974 32304197 ~ 32323673 (-)
LOC110537460 LOC106567949 coding upstream 417741 32333964 ~ 32344103 (-)
umodl1 LOC106568047 coding upstream 474311 32390534 ~ 32401265 (-)
G1061278 NA non-coding downstream 11988 31901678 ~ 31902178 (-)
G1061276 NA non-coding downstream 18289 31895515 ~ 31895877 (-)
G1061275 LOC106603546 non-coding downstream 28398 31884224 ~ 31885768 (-)
G1061273 NA non-coding downstream 31411 31882248 ~ 31882755 (-)
G1061270 LOC106567935 non-coding downstream 34016 31879227 ~ 31880150 (-)
G1061258 stt3a non-coding upstream 14335 31930558 ~ 31932634 (-)
G1061286 NA non-coding upstream 21336 31937559 ~ 31937794 (-)
G1061288 NA non-coding upstream 23904 31940127 ~ 31940547 (-)
G1061291 NA non-coding upstream 29600 31945823 ~ 31946320 (-)
G1061294 NA non-coding upstream 32144 31948367 ~ 31948943 (-)
G1059610 NA other downstream 843306 31067585 ~ 31070860 (-)
LOC110537432 NA other downstream 1140359 30738076 ~ 30773877 (-)
LOC110537425 LOC106567906 other downstream 1277444 30633836 ~ 30638038 (-)
LOC110537417 rnasek other downstream 1461953 30447386 ~ 30452456 (-)
G1059183 NA other downstream 1578910 30334827 ~ 30335256 (-)
G1061331 NA other upstream 74987 31991210 ~ 31992555 (-)
G1062051 NA other upstream 1123262 33039485 ~ 33086066 (-)
G1062603 NA other upstream 1596702 33512925 ~ 33513375 (-)
med13a med13 other upstream 1601542 33419083 ~ 33532690 (-)
LOC110537478 NA other upstream 1790249 33667535 ~ 33707659 (-)

Expression


Co-expression Network