Gene
RNA
| Item | Value |
|---|---|
| gene id | G1061258 |
| gene name | stt3a |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 31930558 ~ 31932634 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| stt3a | Predicted to enable dolichyl-diphosphooligosaccharide-protein glycotransferase activity. Predicted to be involved in post-translational protein modification and protein N-linked glycosylation via asparagine. Predicted to act upstream of or within protein glycosylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in axial mesoderm; hatching gland; musculature system; notochord; and otic placode. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Iw. Orthologous to human STT3A (STT3 oligosaccharyltransferase complex catalytic subunit A). |
| description |
|---|
| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1208959 | True | 937 | lncRNA | 0.49 | 5 | 31930558 | 31932634 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537451 | NA | coding | downstream | 29971 | 31897610 ~ 31900587 (-) |
| LOC110539140 | LOC106567939 | coding | downstream | 90540 | 31837886 ~ 31840018 (-) |
| LOC110536848 | LOC106568063 | coding | downstream | 192184 | 31713248 ~ 31738374 (-) |
| LOC110537443 | LOC106603553 | coding | downstream | 597130 | 31304923 ~ 31333428 (-) |
| LOC110537441 | LOC106567928 | coding | downstream | 695520 | 31229547 ~ 31235038 (-) |
| LOC118937661 | LOC106567942 | coding | upstream | 26993 | 31959627 ~ 31961527 (-) |
| LOC110537458 | LOC106567946 | coding | upstream | 205365 | 32137999 ~ 32300172 (-) |
| LOC110537459 | LOC106567948 | coding | upstream | 371563 | 32304197 ~ 32323673 (-) |
| LOC110537460 | LOC106567949 | coding | upstream | 401330 | 32333964 ~ 32344103 (-) |
| umodl1 | LOC106568047 | coding | upstream | 457900 | 32390534 ~ 32401265 (-) |
| G1061259 | NA | non-coding | downstream | 14335 | 31914166 ~ 31916223 (-) |
| G1061278 | NA | non-coding | downstream | 28380 | 31901678 ~ 31902178 (-) |
| G1061276 | NA | non-coding | downstream | 34681 | 31895515 ~ 31895877 (-) |
| G1061275 | LOC106603546 | non-coding | downstream | 44790 | 31884224 ~ 31885768 (-) |
| G1061273 | NA | non-coding | downstream | 47803 | 31882248 ~ 31882755 (-) |
| G1061286 | NA | non-coding | upstream | 4925 | 31937559 ~ 31937794 (-) |
| G1061288 | NA | non-coding | upstream | 7493 | 31940127 ~ 31940547 (-) |
| G1061291 | NA | non-coding | upstream | 13189 | 31945823 ~ 31946320 (-) |
| G1061294 | NA | non-coding | upstream | 15733 | 31948367 ~ 31948943 (-) |
| G1061295 | NA | non-coding | upstream | 16395 | 31949029 ~ 31949318 (-) |
| G1059610 | NA | other | downstream | 859698 | 31067585 ~ 31070860 (-) |
| LOC110537432 | NA | other | downstream | 1156751 | 30738076 ~ 30773877 (-) |
| LOC110537425 | LOC106567906 | other | downstream | 1293836 | 30633836 ~ 30638038 (-) |
| LOC110537417 | rnasek | other | downstream | 1478345 | 30447386 ~ 30452456 (-) |
| G1059183 | NA | other | downstream | 1595302 | 30334827 ~ 30335256 (-) |
| G1061331 | NA | other | upstream | 58576 | 31991210 ~ 31992555 (-) |
| G1062051 | NA | other | upstream | 1106851 | 33039485 ~ 33086066 (-) |
| G1062603 | NA | other | upstream | 1580291 | 33512925 ~ 33513375 (-) |
| med13a | med13 | other | upstream | 1585131 | 33419083 ~ 33532690 (-) |
| LOC110537478 | NA | other | upstream | 1773838 | 33667535 ~ 33707659 (-) |
