G1061291



Basic Information


Item Value
gene id G1061291
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 31945823 ~ 31946320 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1208997
TGAAGAGGGAGAGGGCATTGcttttaactaagggtatgctgctttaagtctattttcctatgaccataggggttaaattatttttatttgtggagtttttttttagtttattgattttaatttgattaggTTAGTTGAAATTTTGTTTTAcaatttattttgttttgttttacattactCTCATACGGAGAGATGTGTGTAAAACATGGGGGAGGATTCAGTTTTTTGAGGGTTTGAATTGAAGTTATACAACTTAAGTGATATGTGAaggagtgtattgtattgttgagtgtattgttgtgtttgtttttgttctATTCCCGAGGTATAGGTCTAActtccttttttttttaccccttttttctccccaatttcgtggtatccaactgttgtagtagctactatcttgtctcatcgctacaactcccgtacgggctcgacgaaggttgaaagtcatgcgtcctccgatacacaacccaaccagccgcactgcttctt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1208997 True 498 lncRNA 0.36 1 31945823 31946320

Neighbor


gene id symbol gene type direction distance location
LOC110537451 NA coding downstream 45236 31897610 ~ 31900587 (-)
LOC110539140 LOC106567939 coding downstream 105805 31837886 ~ 31840018 (-)
LOC110536848 LOC106568063 coding downstream 207449 31713248 ~ 31738374 (-)
LOC110537443 LOC106603553 coding downstream 612395 31304923 ~ 31333428 (-)
LOC110537441 LOC106567928 coding downstream 710785 31229547 ~ 31235038 (-)
LOC118937661 LOC106567942 coding upstream 13307 31959627 ~ 31961527 (-)
LOC110537458 LOC106567946 coding upstream 191679 32137999 ~ 32300172 (-)
LOC110537459 LOC106567948 coding upstream 357877 32304197 ~ 32323673 (-)
LOC110537460 LOC106567949 coding upstream 387644 32333964 ~ 32344103 (-)
umodl1 LOC106568047 coding upstream 444214 32390534 ~ 32401265 (-)
G1061288 NA non-coding downstream 5276 31940127 ~ 31940547 (-)
G1061286 NA non-coding downstream 8029 31937559 ~ 31937794 (-)
G1061258 stt3a non-coding downstream 13189 31930558 ~ 31932634 (-)
G1061259 NA non-coding downstream 29600 31914166 ~ 31916223 (-)
G1061278 NA non-coding downstream 43645 31901678 ~ 31902178 (-)
G1061294 NA non-coding upstream 2047 31948367 ~ 31948943 (-)
G1061295 NA non-coding upstream 2709 31949029 ~ 31949318 (-)
G1061289 NA non-coding upstream 22189 31968509 ~ 31968794 (-)
G1061313 NA non-coding upstream 23019 31969339 ~ 31969621 (-)
G1059610 NA other downstream 874963 31067585 ~ 31070860 (-)
LOC110537432 NA other downstream 1172016 30738076 ~ 30773877 (-)
LOC110537425 LOC106567906 other downstream 1309101 30633836 ~ 30638038 (-)
LOC110537417 rnasek other downstream 1493610 30447386 ~ 30452456 (-)
G1059183 NA other downstream 1610567 30334827 ~ 30335256 (-)
G1061331 NA other upstream 44890 31991210 ~ 31992555 (-)
G1062051 NA other upstream 1093165 33039485 ~ 33086066 (-)
G1062603 NA other upstream 1566605 33512925 ~ 33513375 (-)
med13a med13 other upstream 1571445 33419083 ~ 33532690 (-)
LOC110537478 NA other upstream 1760152 33667535 ~ 33707659 (-)

Expression



Co-expression Network