G1060555


Basic Information

Item Value
gene id G1060555
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 31979194 ~ 31979605 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1208197
gtcctggtccctttgcagaaaaacagccccaaagcatgatgtttacacccccatgcttcacagtaggtatggtgttctttggatgcaactcggcattctttgtcctccaaacacgacgagttgagtttttaccaaaaagttatattttggtttcatctgaccatatgacattcttcctgtggttctgggatttttgctcaccattcttgtgatcattttgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1208197 True 222 lncRNA 0.42 2 31979194 31979605

Neighbor

gene id symbol gene type direction distance location
LOC110537456 LOC105010978 coding upstream 10252 31961376 ~ 31968942 (+)
LOC110537455 LOC106567942 coding upstream 18278 31955273 ~ 31960916 (+)
stt3a stt3a coding upstream 46556 31917035 ~ 31932638 (+)
LOC110537452 LOC106567936 coding upstream 62967 31905481 ~ 31916227 (+)
LOC110537450 LOC106603546 coding upstream 89739 31864334 ~ 31889455 (+)
LOC110537457 wnt11 coding downstream 25549 32005154 ~ 32027744 (+)
LOC110537461 LOC106567950 coding downstream 372147 32351752 ~ 32382873 (+)
LOC110537463 LOC106567953 coding downstream 424710 32404315 ~ 32410155 (+)
LOC110537465 LOC106567954 coding downstream 436852 32416457 ~ 32438081 (+)
prdm15 LOC106567952 coding downstream 458713 32438318 ~ 32454813 (+)
G1060536 NA non-coding upstream 75101 31903347 ~ 31904093 (+)
G1060535 NA non-coding upstream 76598 31902373 ~ 31902596 (+)
G1060533 NA non-coding upstream 80470 31898521 ~ 31898724 (+)
G1060531 NA non-coding upstream 83783 31895157 ~ 31895411 (+)
G1060602 NA non-coding downstream 81395 32061000 ~ 32080346 (+)
G1060718 NA non-coding downstream 324599 32304204 ~ 32321208 (+)
G1060911 NA non-coding downstream 633645 32613250 ~ 32614551 (+)
G1060932 LOC106567958 non-coding downstream 680087 32659692 ~ 32660196 (+)
G1060470 NA other upstream 167847 31811062 ~ 31811347 (+)
G1059685 LOC106567926 other upstream 769837 31207629 ~ 31209357 (+)
G1059091 NA other upstream 972128 31000227 ~ 31007066 (+)
LOC110537434 NA other upstream 1100083 30848508 ~ 30879117 (+)
G1058787 LOC106567901 other upstream 1462304 30516081 ~ 30516890 (+)
G1062404 NA other downstream 1380129 33359734 ~ 33366249 (+)
G1062537 NA other downstream 1528714 33508319 ~ 33508863 (+)
G1062648 NA other downstream 1678673 33658278 ~ 33661949 (+)
ubb ubb other downstream 2787419 34766968 ~ 34770882 (+)
LOC110537506 LOC106567992 other downstream 2996687 34964222 ~ 34982028 (+)

Expression


Co-expression Network