G1061666


Basic Information

Item Value
gene id G1061666
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 32484718 ~ 32485654 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1209427
TTTGGCATGACCAAGCGCAAATATGTTAACTgcgatatgactaaagagttcatCAGGgtaatttttccacaaatagacaactattttcctttccatggtagcaagatctcatctatttttgctaactttctataaacatgtattggagtgagattaTGTATTTCTTTCGGGATATGTATCCAAGTATGTTGTgtcgctgtgtctttgtgagacgcagagtaggtgaacggatgatctctgcatgtgtggttcccaccatgaagcatggaggaggaggtgtgatggtgctttgctgatgacactctgtgatgtatttagaattcaaggcacacttaaccagcatggcgaccacagcattctgcagcgttacgccatcccatctggtttgcacttagtgggactatcatttgtttttctacaagacaatgacccaaaacacacctacaggctgtgtaagggctatttgaccccTCCATCCCAGGTCAACCCCTCTTCTAAAAATTATCCTCTGGCAGGCAGTTCAGGACCAAAACCTCCCGCTACTTGAACAGTTTCTTTCCCCaggctgtggccctcaccaactggcTGGTAGAGAGTAAAGGACTATGTACTCTCTGCTGCACAACACATTAAGCCATCTCTGAACTGTACACAAAATAACTGCACTATACTATACATTTGCACTCTGTTCATCTCTCTGCATTTAGATATATTCATACTGATTCAGTACATTTGTACATCCATTGTAGATCAACTgtatacctactgtttgtatatttgtatatccCCTGCCCATTCTCTATAGCTCTatgctcactctgccaagttgtATATAATGTATTACAGTATGTAAACTTTGTGTAAACTCTActgtctgtgttctgtctctaaacGTTGACTATCGATACCAGCGCCAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1209427 True 917 lncRNA 0.42 2 32484718 32485654

Neighbor

gene id symbol gene type direction distance location
LOC118937881 LOC106568064 coding downstream 9598 32472658 ~ 32475120 (-)
LOC110537466 LOC106567955 coding downstream 68439 32414563 ~ 32416279 (-)
umodl1 LOC106568047 coding downstream 83453 32390534 ~ 32401265 (-)
LOC110537460 LOC106567949 coding downstream 140615 32333964 ~ 32344103 (-)
LOC110537459 LOC106567948 coding downstream 161045 32304197 ~ 32323673 (-)
LOC110537471 LOC106567958 coding upstream 171083 32656737 ~ 33146644 (-)
LOC118937663 NA coding upstream 354732 32840386 ~ 32842865 (-)
LOC118937664 NA coding upstream 872793 33358447 ~ 33392252 (-)
LOC110537472 ints2 coding upstream 910920 33396574 ~ 33418705 (-)
med13a med13 coding upstream 933429 33419083 ~ 33532690 (-)
G1061574 LOC106567950 non-coding downstream 104611 32377214 ~ 32380107 (-)
G1061483 NA non-coding downstream 213538 32187869 ~ 32271180 (-)
G1061430 NA non-coding downstream 359568 32122866 ~ 32125150 (-)
G1061325 NA non-coding downstream 505569 31978924 ~ 31979149 (-)
G1061324 NA non-coding downstream 506015 31978329 ~ 31978703 (-)
G1061676 NA non-coding upstream 21281 32506935 ~ 32507183 (-)
G1061669 NA non-coding upstream 47515 32533169 ~ 32556542 (-)
G1061708 NA non-coding upstream 64887 32550541 ~ 32579617 (-)
G1061735 NA non-coding upstream 90176 32575830 ~ 32665872 (-)
G1061745 NA non-coding upstream 105409 32591063 ~ 32701179 (-)
G1061331 NA other downstream 492163 31991210 ~ 31992555 (-)
G1059610 NA other downstream 1413858 31067585 ~ 31070860 (-)
LOC110537432 NA other downstream 1710911 30738076 ~ 30773877 (-)
LOC110537425 LOC106567906 other downstream 1847996 30633836 ~ 30638038 (-)
LOC110537417 rnasek other downstream 2032505 30447386 ~ 30452456 (-)
G1062051 NA other upstream 553831 33039485 ~ 33086066 (-)
G1062603 NA other upstream 1027271 33512925 ~ 33513375 (-)
LOC110537478 NA other upstream 1220818 33667535 ~ 33707659 (-)
cenpv LOC107676655 other upstream 2271600 34755024 ~ 34759345 (-)

Expression


Co-expression Network