G1061925


Basic Information

Item Value
gene id G1061925
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 32824997 ~ 32825667 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1209702
TCGCAAGGAGAATTTTTGCTTAGTTAATTGTAGACGTAACCATTGAACATAAATTCCCATTAGGAATCAATTTGTTACCCTCCGCAGCCTGTGACCCCACCCCCTCCCTGGCTGGTTGGATGGCTGTTGGGCTTGTTTTGACCAGCATGGTTAGTCGAGCTACCATAGTAGTTTATTAGAATGGAATCCAATAAGCTTCACATACACTGCTTTATTGTTACTTGGTCATGCATATGTAGTACAGTAAGCTCACGGTTTATCCAATAATTTATGCCTCTAAATATCCATGTTATGACACTAATACACAAGCTGCCTGACTCGGCCTGGGCTGTGCTGGGGCTGGCCACCcaaacagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaaaaaaaaaaaagagtgatTGTTTCGGGTTGAGACGGCATGGCATGGCTGTAGGATCTATGACTCACAGGTACCATGTTGCCTGGCCCCCACAGACAACTCTAATTGCTTTACATCTGTACAAAGGTTTTTTCTAATCGGGCCTTCTGCCTCCATTTGTCTTGCTTTCAGTCTCCTAGTGAACGGCCTTAATTGATCTTAGTGGGGCTTTTTCTCACCAGCTTGCTCCCGGGCTTGAGCTAGGAAAACTCTGCACCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1209702 True 671 lncRNA 0.43 1 32824997 32825667
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118937881 LOC106568064 coding downstream 349877 32472658 ~ 32475120 (-)
LOC110537466 LOC106567955 coding downstream 408718 32414563 ~ 32416279 (-)
umodl1 LOC106568047 coding downstream 423732 32390534 ~ 32401265 (-)
LOC110537460 LOC106567949 coding downstream 480894 32333964 ~ 32344103 (-)
LOC110537459 LOC106567948 coding downstream 501324 32304197 ~ 32323673 (-)
LOC118937663 NA coding upstream 14719 32840386 ~ 32842865 (-)
LOC118937664 NA coding upstream 532780 33358447 ~ 33392252 (-)
LOC110537472 ints2 coding upstream 570907 33396574 ~ 33418705 (-)
med13a med13 coding upstream 593416 33419083 ~ 33532690 (-)
rps6kb1a LOC106567964 coding upstream 800096 33625763 ~ 33637546 (-)
G1061911 NA non-coding downstream 17887 32806867 ~ 32807110 (-)
G1061906 NA non-coding downstream 25021 32799758 ~ 32799976 (-)
G1061899 NA non-coding downstream 35717 32789025 ~ 32789280 (-)
G1061895 NA non-coding downstream 40968 32783553 ~ 32784029 (-)
G1061890 NA non-coding downstream 46668 32778021 ~ 32778329 (-)
G1061926 NA non-coding upstream 1996 32827663 ~ 32827895 (-)
G1061927 NA non-coding upstream 2785 32828452 ~ 32828671 (-)
G1061932 NA non-coding upstream 10084 32835751 ~ 32835964 (-)
G1061937 NA non-coding upstream 20591 32846258 ~ 32846612 (-)
G1061941 NA non-coding upstream 25591 32851258 ~ 32851458 (-)
G1061331 NA other downstream 832442 31991210 ~ 31992555 (-)
G1059610 NA other downstream 1754137 31067585 ~ 31070860 (-)
LOC110537432 NA other downstream 2051190 30738076 ~ 30773877 (-)
LOC110537425 LOC106567906 other downstream 2188275 30633836 ~ 30638038 (-)
LOC110537417 rnasek other downstream 2372784 30447386 ~ 30452456 (-)
G1062051 NA other upstream 213818 33039485 ~ 33086066 (-)
G1062603 NA other upstream 687258 33512925 ~ 33513375 (-)
LOC110537478 NA other upstream 880805 33667535 ~ 33707659 (-)
cenpv LOC107676655 other upstream 1931587 34755024 ~ 34759345 (-)

Expression

G1061925 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.4.
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G1061925 Expression in each Bioproject

Bar chart with 14 bars.
G1061925 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network