G1061153


Basic Information

Item Value
gene id G1061153
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 33039534 ~ 33086053 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1208848
cccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgggctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1208848 True 451 lncRNA 0.45 2 33039534 33086053

Neighbor

gene id symbol gene type direction distance location
cxadr LOC106567957 coding upstream 424544 32555056 ~ 32614990 (+)
btg3 btg3 coding upstream 484878 32546918 ~ 32554656 (+)
LOC110537469 LOC106567749 coding upstream 504848 32504245 ~ 32534686 (+)
LOC110537467 LOC106567956 coding upstream 568163 32458471 ~ 32471371 (+)
prdm15 LOC106567952 coding upstream 584721 32438318 ~ 32454813 (+)
LOC110537474 NA coding downstream 415881 33501934 ~ 33513654 (+)
rnft1 LOC106567963 coding downstream 512886 33598939 ~ 33624023 (+)
ptrh2 ptrh2 coding downstream 696761 33782814 ~ 33784617 (+)
LOC110537484 LOC106567971 coding downstream 786962 33873015 ~ 33880271 (+)
abr LOC106567975 coding downstream 1048455 34134508 ~ 34360009 (+)
G1061084 NA non-coding upstream 114658 32914260 ~ 32924876 (+)
G1061038 NA non-coding upstream 190703 32848581 ~ 32848831 (+)
G1061036 NA non-coding upstream 192514 32846811 ~ 32847020 (+)
G1061034 NA non-coding upstream 194754 32844475 ~ 32844780 (+)
G1061031 NA non-coding upstream 199269 32840028 ~ 32840265 (+)
G1062148 NA non-coding downstream 74608 33160661 ~ 33177137 (+)
G1062204 NA non-coding downstream 113012 33199065 ~ 33199314 (+)
G1062207 NA non-coding downstream 114792 33200845 ~ 33201149 (+)
G1062215 NA non-coding downstream 121437 33207490 ~ 33207925 (+)
G1062233 NA non-coding downstream 134427 33220480 ~ 33220800 (+)
G1060470 NA other upstream 1228187 31811062 ~ 31811347 (+)
G1059685 LOC106567926 other upstream 1830177 31207629 ~ 31209357 (+)
G1059091 NA other upstream 2032468 31000227 ~ 31007066 (+)
LOC110537434 NA other upstream 2160423 30848508 ~ 30879117 (+)
G1058787 LOC106567901 other upstream 2522644 30516081 ~ 30516890 (+)
G1062404 NA other downstream 273681 33359734 ~ 33366249 (+)
G1062537 NA other downstream 422266 33508319 ~ 33508863 (+)
G1062648 NA other downstream 572225 33658278 ~ 33661949 (+)
ubb ubb other downstream 1680971 34766968 ~ 34770882 (+)
LOC110537506 LOC106567992 other downstream 1890239 34964222 ~ 34982028 (+)

Expression


Co-expression Network