G1062404


Basic Information

Item Value
gene id G1062404
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 33359734 ~ 33366249 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1210204
atatgctcactgcccacaaaatgaggtggaaactgtttatttattttcccttttcccttttgtactttcccttttctcttttgtactttcccttttccattttgtactttcccttttcccttttgtattttcccttttcccttttgtactttcccttttcccttttgtactttcccttttgtactttcccttttcccttttgtactttcccttttccattttgtactttcccttttcccttttgtactttcccttttccattttgtactttccattttcccttttgtactttcccttttccattttgtactttcccttttcccttttgtactttcccttttccattttgtactttcccttttccattttgtactttcccttttccattttata
>TU1210205
atatgctcactgcccacaaaatgaggtggaaactgtttatttattttcccttttcccttttgtactttcccttttctcttttgtactttcccttttccattttgtactttcccttttcccttttgtattttcccttttcccttttgtactttcccttttcccttttgtactttcccttttgtactttcccttttcccttttgtactttcccttttccattttgtactttcccttttcccttttgtactttcccttttgtactttcccttttcccttttgtattttcccttttcccttttgtactttcccttttcccttttgtactttcccttttcccttttgtactttcccttttcccttttgtactttcccttttttactttcccttttcccttttgtactttcccttttcccttttgtattttcccttttcccttttgtactttcccttttcccttttttactttcccttttccattttgtactttcccttttccattttgtactttcccttttccattttgtactttcccttttgtactttccattttcctttttgtactttcccttttcccttttttactttcccttttcccttttttactttcccttttccattttgtactttcccttttcccttttgtactttcccttttcccttttttactttcccttttccattttgtactttcccttttcccttttcccttttgtattttcccttttgtactttcccttttcccttttgtactttcccttttcccttttttactttcccttttccattttgtactttcccttttcccttttgtactttcccttttgtactttccattttc
>TU1210206
atatgctcactgcccacaaaatgaggtggaaactgtttatttattttcccttttcccttttgtactttcccttttctcttttgtactttcccttttccattttgtactttcccttttcccttttgtattttcccttttcccttttgtactttcccttttcccttttgtactttcccttttgtactttcccttttcccttttgtactttcccttttccattttgtactttcccttttcccttttgtactttcccttttgtactttcccttttcccttttgtactttcccttttcccttttgtattttcccttttcccttttgtactttcccttttcccttttgtactttcccttttcccttttgtattttcccttttcccttttgtactttcccttttcccttttgtactttcccttttccattttgtattttcccttttcccttttgtactttcccttttcccttttgtactttcccttttccattttgtactttcccttttcccttttgtactttcccttttcccttttgtactttcccttttcccttttgtactttcccttttcccttttgtactt
>TU1210207
atatgctcactgcccacaaaatgaggtggaaactgtttatttattttcccttttcccttttgtactttcccttttctcttttgtactttcccttttccattttgtactttccctttttttactttcccttttcccttttgtactttcccttttcccttttgtactttcccttttcccttttgtactttcccttttcccttttgtactttcccttttcccttttgtactttcccttttcccttttgtactttcccttttctcttttgtactttcccttttccattttgtactttcccttttccattttgtactttcccttttccattttgtactttcccttttccattt
>TU1210208
atatgctcactgcccacaaaatgaggtggaaactgtttatttattttcccttttcccttttgtactttcccttttctcttttgtactttcccttttccattttgtactttccctttttttactttcccttttcccttttgtactttcccttttcccttttgtactttcccttttcccttttgtactttcccttttcccttttgtactttcccttttcccttttgtactttcccttttcccttttgtactttcccttttctcttttgtactttcccttttcccttttgtactttcccttttcccttttgtactttcccttttcccttttttactttcccttttccattttgtactttcccttttcccttttgtactttcccttttgtactttccattttc

Function

NR:

description
PREDICTED: eukaryotic translation initiation factor 4 gamma-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1210204 False 393 lncRNA 0.35 3 33359734 33364161
TU1210205 False 839 TUCP 0.35 3 33359734 33366249
TU1210206 False 578 TUCP 0.36 2 33359734 33362605
TU1210207 False 348 lncRNA 0.35 3 33359734 33363954
TU1210208 True 399 lncRNA 0.36 3 33359734 33361580

Neighbor

gene id symbol gene type direction distance location
cxadr LOC106567957 coding upstream 744744 32555056 ~ 32614990 (+)
btg3 btg3 coding upstream 805078 32546918 ~ 32554656 (+)
LOC110537469 LOC106567749 coding upstream 825048 32504245 ~ 32534686 (+)
LOC110537467 LOC106567956 coding upstream 888363 32458471 ~ 32471371 (+)
prdm15 LOC106567952 coding upstream 904921 32438318 ~ 32454813 (+)
LOC110537474 NA coding downstream 137773 33501934 ~ 33513654 (+)
rnft1 LOC106567963 coding downstream 234778 33598939 ~ 33624023 (+)
ptrh2 ptrh2 coding downstream 418653 33782814 ~ 33784617 (+)
LOC110537484 LOC106567971 coding downstream 508854 33873015 ~ 33880271 (+)
abr LOC106567975 coding downstream 770347 34134508 ~ 34360009 (+)
G1062401 NA non-coding upstream 2676 33355522 ~ 33357058 (+)
G1062343 NA non-coding upstream 26494 33332981 ~ 33333240 (+)
G1062265 NA non-coding upstream 112376 33247153 ~ 33247358 (+)
G1062244 NA non-coding upstream 124879 33234469 ~ 33234855 (+)
G1062234 NA non-coding upstream 137486 33222035 ~ 33222248 (+)
G1062459 ints2 non-coding downstream 35735 33399896 ~ 33404496 (+)
G1062500 NA non-coding downstream 91870 33456031 ~ 33459797 (+)
G1062512 NA non-coding downstream 115277 33479438 ~ 33479661 (+)
G1062513 NA non-coding downstream 115588 33479749 ~ 33479994 (+)
G1062515 NA non-coding downstream 119330 33483491 ~ 33483757 (+)
G1060470 NA other upstream 1548387 31811062 ~ 31811347 (+)
G1059685 LOC106567926 other upstream 2150377 31207629 ~ 31209357 (+)
G1059091 NA other upstream 2352668 31000227 ~ 31007066 (+)
LOC110537434 NA other upstream 2480623 30848508 ~ 30879117 (+)
G1058787 LOC106567901 other upstream 2842844 30516081 ~ 30516890 (+)
G1062537 NA other downstream 144158 33508319 ~ 33508863 (+)
G1062648 NA other downstream 294117 33658278 ~ 33661949 (+)
ubb ubb other downstream 1402863 34766968 ~ 34770882 (+)
LOC110537506 LOC106567992 other downstream 1612131 34964222 ~ 34982028 (+)
LOC110524522 LOC106605670 other downstream 2106339 35468060 ~ 35471779 (+)

Expression


Co-expression Network