Gene
RNA
| Item | Value |
|---|---|
| gene id | G1062588 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 33488705 ~ 33489002 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1210433 | True | 298 | lncRNA | 0.49 | 1 | 33488705 | 33489002 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537472 | ints2 | coding | downstream | 70000 | 33396574 ~ 33418705 (-) |
| LOC118937664 | NA | coding | downstream | 96453 | 33358447 ~ 33392252 (-) |
| LOC110537471 | LOC106567958 | coding | downstream | 342061 | 32656737 ~ 33146644 (-) |
| LOC118937663 | NA | coding | downstream | 645840 | 32840386 ~ 32842865 (-) |
| LOC118937881 | LOC106568064 | coding | downstream | 1013585 | 32472658 ~ 32475120 (-) |
| rps6kb1a | LOC106567964 | coding | upstream | 136761 | 33625763 ~ 33637546 (-) |
| LOC110537478 | NA | coding | upstream | 178533 | 33667535 ~ 33707659 (-) |
| LOC110537479 | NA | coding | upstream | 220326 | 33709328 ~ 33746715 (-) |
| cltca | LOC106567969 | coding | upstream | 301653 | 33790655 ~ 33855473 (-) |
| LOC110537486 | LOC106567973 | coding | upstream | 388387 | 33877389 ~ 34082067 (-) |
| G1062584 | NA | non-coding | downstream | 4094 | 33484293 ~ 33484611 (-) |
| G1062581 | NA | non-coding | downstream | 9151 | 33479341 ~ 33479554 (-) |
| G1062580 | NA | non-coding | downstream | 10009 | 33478487 ~ 33478696 (-) |
| G1062572 | NA | non-coding | downstream | 28028 | 33455927 ~ 33460677 (-) |
| G1062568 | NA | non-coding | downstream | 50407 | 33437710 ~ 33438298 (-) |
| G1062594 | NA | non-coding | upstream | 14275 | 33503277 ~ 33503565 (-) |
| G1062595 | NA | non-coding | upstream | 14605 | 33503607 ~ 33503818 (-) |
| G1062598 | NA | non-coding | upstream | 19025 | 33508027 ~ 33508262 (-) |
| G1062601 | NA | non-coding | upstream | 23125 | 33512127 ~ 33512370 (-) |
| G1062602 | LOC106605384 | non-coding | upstream | 23564 | 33512566 ~ 33512794 (-) |
| G1062051 | NA | other | downstream | 402639 | 33039485 ~ 33086066 (-) |
| G1061331 | NA | other | downstream | 1496150 | 31991210 ~ 31992555 (-) |
| G1059610 | NA | other | downstream | 2417845 | 31067585 ~ 31070860 (-) |
| LOC110537432 | NA | other | downstream | 2714898 | 30738076 ~ 30773877 (-) |
| LOC110537425 | LOC106567906 | other | downstream | 2851983 | 30633836 ~ 30638038 (-) |
| G1062603 | NA | other | upstream | 23923 | 33512925 ~ 33513375 (-) |
| med13a | med13 | other | upstream | 28763 | 33419083 ~ 33532690 (-) |
| cenpv | LOC107676655 | other | upstream | 1268252 | 34755024 ~ 34759345 (-) |
| LOC110537499 | emc6 | other | upstream | 1316757 | 34805721 ~ 34807675 (-) |
