G1064912 (mrpl22)


Basic Information

Item Value
gene id G1064912
gene name mrpl22
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 35476837 ~ 35484504 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1212981
CCCACATATATGATTTATTATTACATATCAAATCACAAACAGTAATAGTTTCCCTAGAGTGCGTGGATAATGGTGCGACTCTTGAGCTGTTCAACGTACTTCTTGGCCTGGTCGAAGCCAGTCTTCTGTTCTGCCTTCGGTGGAAGCCCCTCCACCAGCTTGACAAAGTAGTGGCAGTGCACTTTATCCATGATCCCAAACATTCCTCTGCCATGGTAACGGATACGTTTCAGGTACTTCCCCTTGTTGGAGAATGATTCCGCAACATATAAATTGGACTTGTATTCCACATTGTGATTCCTGACTGCCATCTCCTGGGCTTCCAAGAGAACCTCTTTCATGATATTTGCCCCCTTTTTGTCATTGAACTCAAGCTGTGCAATGGCCTCATCAATAGTCATTCCTCTGATCATATTTGCTAGATACCACATCTTGTCCTTGCTGTACTTGATTTGCCTCCTGCAGTGGTGCACCTCTGCAGGTCTTCGTGCTTCATCAGGCTGCTGTGGTGGGAACATTTGCAGGTTCTTCCTGTCCCAGTTCTTGTTGACATCTAATGCGGCGCTGGTGTGGATGCAGGGGAGCTTCTGGGTTTTACCAAAGGCAAATAGCCTGGATAGAGAAGAGAACTTCGCtaagaagctaacgttagctagctaacgtttgagAAGTTATAGACAGAAAGAGGTGCAATACAAAAAATCTGGCAAATACTTGTAATAGGTAAAATTATGGAAGTTGTAAGCACATATATAACTTCACTGCTTGATTTGTCCTTCACTGAAATTACAGCGCTGTTAACTCGTGTGCTGGTTCTCCTTACCTTGAGCGTATCTGCCCAGCAACACTCGT

Function

symbol description
mrpl22 Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosome assembly. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL22 (mitochondrial ribosomal protein L22).

NR:

description
39S ribosomal protein L22, mitochondrial isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1212981 True 852 TUCP 0.44 5 35476837 35484504

Neighbor

gene id symbol gene type direction distance location
LOC110537510 mfap3 coding downstream 75610 35396884 ~ 35401227 (-)
LOC110537509 galnt10 coding downstream 217900 35122172 ~ 35260534 (-)
LOC110537508 LOC106567994 coding downstream 362032 35071760 ~ 35114805 (-)
LOC110537504 LOC106567991 coding downstream 462564 34979146 ~ 35014273 (-)
LOC110537503 NA coding downstream 513878 34961595 ~ 34962959 (-)
LOC110537516 LOC106568002 coding upstream 808203 36292707 ~ 36310874 (-)
LOC110537517 wwc1 coding upstream 826611 36311115 ~ 36358023 (-)
LOC110537518 LOC106568005 coding upstream 913094 36397598 ~ 36400542 (-)
LOC110539141 NA coding upstream 927748 36412165 ~ 36413564 (-)
LOC110537521 LOC106568007 coding upstream 1028689 36513193 ~ 36620615 (-)
G1064932 NA non-coding downstream 8086 35468474 ~ 35468751 (-)
G1064931 NA non-coding downstream 8450 35468165 ~ 35468387 (-)
G1064910 NA non-coding downstream 49444 35427188 ~ 35427393 (-)
G1064904 NA non-coding downstream 58766 35417274 ~ 35418071 (-)
G1064905 fam114a2 non-coding downstream 68154 35407735 ~ 35408683 (-)
G1064943 NA non-coding upstream 2630 35487134 ~ 35487368 (-)
G1064944 NA non-coding upstream 2989 35487493 ~ 35487692 (-)
G1064945 NA non-coding upstream 3219 35487723 ~ 35488874 (-)
G1064946 NA non-coding upstream 4483 35488987 ~ 35489195 (-)
G1064970 NA non-coding upstream 34104 35518608 ~ 35518833 (-)
LOC110537499 emc6 other downstream 669206 34805721 ~ 34807675 (-)
cenpv LOC107676655 other downstream 717671 34755024 ~ 34759345 (-)
LOC110537478 NA other downstream 1769178 33667535 ~ 33707659 (-)
med13a med13 other downstream 1944196 33419083 ~ 33532690 (-)
G1065969 NA other upstream 307851 35792355 ~ 35810394 (-)
G1066054 NA other upstream 454739 35939243 ~ 35939571 (-)
G1066163 NA other upstream 614526 36099030 ~ 36099474 (-)
G1067390 LOC106568016 other upstream 1424927 36909431 ~ 36912757 (-)
G1067426 NA other upstream 1452815 36937319 ~ 36937979 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_019758 mrpl22 coding NC_007132.7 CM002905.2 36381960 ~ 36396334 (-)