G1064945


Basic Information

Item Value
gene id G1064945
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 35487723 ~ 35488874 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1213014
GCAAGTGGCTCtgtaataatacaaaataaatattttatacactacatgaccaaaagtatatggacacgtGCTCGTCAAGCATcaaattccaaaatcatgggcattaatatggagttggtaccaCCTTTGCTAcaacaacagcctccactcttctgggaaggctttccactaaatgttgaaacattgctgcggggacttccttccattcagccacaagagcattagtggcagtgatgttgggcgattaggcctggcttgcagtcagtgttccaattcatcccaaaggtgttcgatggggttacgGTCAGGATACATTTTTGTAttgaccttgctttgtgcacgggggcactgtcatgctgaaacaggaaacggccttccccaaactgttgccacaaagctggaagcacagaatagtctagaatgtcattgtatgctgtagcgttaagatttcccttcactggaactaagtggccaagcctgaaccatgaaaaacagccacagaccattttGCCTCctatccaccaaactttacagttggtactaggcattcgggcaggtagcattctcctggcatccgctaaacccagattaatctgtcagactgccagagaaggcattttcactgctccagagtccaatggaggcgagctttaaACCACTCAAGCCGACGCTAGtctttgcgcatggtgatcttacgcTTGTGTGGGGCTGCTAGGCCATGGAAACCTACTTCAGTacggaacttggtagtgagtgttgcaacagaggacaggcaATTTTTACAAAGACGcgttctttgagcttgtgtggcctaccacttcaaggctgagccgttgtttctcctacacgtttccatttcacaataacagcatttacagttgaccagggcagctcaagaaaggcagaaatttgacgaactgacttgttaaaaaggtggcatcctatgacggtgccacgttgaaagtcactgagctcttcagtaaggccattctactgccaatgtttgtctttgagagtgcatggctgtgtgctcgattttatatacctgtcagcaacgggtgtggctgaaatagccaagtCCACGAATTTGAAGcagtgtccaaatacttttgaatatatacactgctcaaaaaaataaagggaacactaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1213014 True 1152 lncRNA 0.45 1 35487723 35488874

Neighbor

gene id symbol gene type direction distance location
LOC110537510 mfap3 coding downstream 86496 35396884 ~ 35401227 (-)
LOC110537509 galnt10 coding downstream 228786 35122172 ~ 35260534 (-)
LOC110537508 LOC106567994 coding downstream 372918 35071760 ~ 35114805 (-)
LOC110537504 LOC106567991 coding downstream 473450 34979146 ~ 35014273 (-)
LOC110537503 NA coding downstream 524764 34961595 ~ 34962959 (-)
LOC110537516 LOC106568002 coding upstream 803833 36292707 ~ 36310874 (-)
LOC110537517 wwc1 coding upstream 822241 36311115 ~ 36358023 (-)
LOC110537518 LOC106568005 coding upstream 908724 36397598 ~ 36400542 (-)
LOC110539141 NA coding upstream 923378 36412165 ~ 36413564 (-)
LOC110537521 LOC106568007 coding upstream 1024319 36513193 ~ 36620615 (-)
G1064944 NA non-coding downstream 31 35487493 ~ 35487692 (-)
G1064943 NA non-coding downstream 355 35487134 ~ 35487368 (-)
G1064932 NA non-coding downstream 18972 35468474 ~ 35468751 (-)
G1064931 NA non-coding downstream 19336 35468165 ~ 35468387 (-)
G1064910 NA non-coding downstream 60330 35427188 ~ 35427393 (-)
G1064946 NA non-coding upstream 113 35488987 ~ 35489195 (-)
G1064970 NA non-coding upstream 29734 35518608 ~ 35518833 (-)
G1064980 NA non-coding upstream 42213 35531087 ~ 35531311 (-)
G1064985 NA non-coding upstream 46960 35535834 ~ 35536049 (-)
G1065063 NA non-coding upstream 99088 35587962 ~ 35588195 (-)
G1064912 mrpl22 other downstream 3219 35476837 ~ 35484504 (-)
LOC110537499 emc6 other downstream 680092 34805721 ~ 34807675 (-)
cenpv LOC107676655 other downstream 728557 34755024 ~ 34759345 (-)
LOC110537478 NA other downstream 1780064 33667535 ~ 33707659 (-)
G1065969 NA other upstream 303481 35792355 ~ 35810394 (-)
G1066054 NA other upstream 450369 35939243 ~ 35939571 (-)
G1066163 NA other upstream 610156 36099030 ~ 36099474 (-)
G1067390 LOC106568016 other upstream 1420557 36909431 ~ 36912757 (-)
G1067426 NA other upstream 1448445 36937319 ~ 36937979 (-)

Expression


Co-expression Network