G1066291


Basic Information

Item Value
gene id G1066291
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 36396126 ~ 36660076 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1214465
ccaggacgacatgagaggatatttttaaaagTACTGGAccgctttgtgacatcaaatggactggtcaagatGTGtttatctgtactgatggcacaaaagccatgacagggagacatagtggaggggtaacgcgcgtgcaagcagttcctcctgacaccacttgggtacactgtgGCATCCAtcaagaggctcttgctgcaaaggaaatgcctgacagcttgaaagacattttggacactacagtaaaaatgattaactttgttaaagcaaggcccctggaCGCtcgtattttctgcattatgcaatgatatgggtcTCGACCATTAACGCTTTTACGACCAGGCCcaccacatctgttgactcatccagctgtaacgcatataattcactgtgctggttatcaaggggcaaagtattaaCACGTTTTTAAAaattgagagatgagcttaaagttGTCTTTACTGACCATTTTCatttgtctgaccgcttgcatgatgacgagtttctcacacgactggcgtATCTGGCTAAGGTTTTTTTCTCgcttgaatgatctgaatctaggattactgggactctgcaactatattcaatgtgcgggataaaattgaggctatgattaagaagttgtaGATTATCTCTCTGCATTAACAAGGGAAACACAGGTCTTTcgatcattgttttattttttgtgtgtgcatgtaaccTGTAActgcgttgtgtgtggttgattgagactatagacgtggactttggagatcaggtagttttaatcaaGCAGAACTCACTCtgaggaaataaaacatttgtagagcacatatgttctgagaatcgtcgcctctttctctctcagtgcatcaaaataATTTTTGAATACAAAAATGTATACACTCTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1214465 True 895 lncRNA 0.41 2 36396126 36660076

Neighbor

gene id symbol gene type direction distance location
LOC110537517 wwc1 coding downstream 38103 36311115 ~ 36358023 (-)
LOC110537516 LOC106568002 coding downstream 85252 36292707 ~ 36310874 (-)
LOC110537510 mfap3 coding downstream 994899 35396884 ~ 35401227 (-)
LOC110537509 galnt10 coding downstream 1137189 35122172 ~ 35260534 (-)
LOC110537508 LOC106567994 coding downstream 1281321 35071760 ~ 35114805 (-)
LOC110537524 LOC106568011 coding upstream 10428 36670504 ~ 36700574 (-)
LOC110537525 NA coding upstream 47443 36707448 ~ 36709032 (-)
fgfr4 LOC106568015 coding upstream 110172 36770248 ~ 36789915 (-)
rab24 LOC106568018 coding upstream 254735 36914811 ~ 36921183 (-)
trnal-caa-105 NA coding upstream 276144 36936220 ~ 36936330 (-)
G1066315 NA non-coding downstream 16943 36378788 ~ 36379183 (-)
G1066257 NA non-coding downstream 125815 36270087 ~ 36270311 (-)
G1066254 NA non-coding downstream 128724 36267160 ~ 36267402 (-)
G1066253 NA non-coding downstream 129817 36265967 ~ 36266309 (-)
G1066248 NA non-coding downstream 137652 36258246 ~ 36258474 (-)
G1066587 NA non-coding upstream 193563 36853639 ~ 36853868 (-)
G1066588 NA non-coding upstream 194374 36854450 ~ 36854703 (-)
G1066593 NA non-coding upstream 200207 36860283 ~ 36860562 (-)
G1067400 NA non-coding upstream 222249 36882325 ~ 36882600 (-)
G1066163 NA other downstream 296652 36099030 ~ 36099474 (-)
G1066054 NA other downstream 456555 35939243 ~ 35939571 (-)
G1065969 NA other downstream 585732 35792355 ~ 35810394 (-)
G1064912 mrpl22 other downstream 911622 35476837 ~ 35484504 (-)
G1067390 LOC106568016 other upstream 249355 36909431 ~ 36912757 (-)
G1067426 NA other upstream 277243 36937319 ~ 36937979 (-)
LOC110537534 LOC106568022 other upstream 359925 37019987 ~ 37039930 (-)
LOC110537540 LOC106567738 other upstream 845804 37505206 ~ 37507238 (-)
LOC110537546 ppm1e other upstream 943089 37603158 ~ 37667366 (-)

Expression


Co-expression Network