G1066338


Basic Information

Item Value
gene id G1066338
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 36448196 ~ 36449810 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1214516
ACACACGCAGTCACATCAAGTGGAGGCAGCTCATTAATTCTAACCAAGACTACTACCATATAAAGACAAAAAGGCTAGTTTCATGTCATGACAACATCACTACATGTGCCACTTGAAATCTAAATTATGCATTATGAAGGATGACGTCTGTACAGTGAACAGATTGGACCACAGTGTGTTTCCTTACATCAGGGGTGAAGGGGGCCTTCAGCCTGCCAGCCTTCAGCCTTTTAAAGTTGATGGATCGGAAGATGTGGTGGGCCTTCACCTCCGTAGCACCCTCCCCCTGGCAGCCCAGCCTCTCACTGGGCTCTTTGGCCAGCAGCTTTGCAGAGGGACTTGGTGTCCTCTGAGAACTTGTCTGAGTACTCCTCCTCCACGTCTCTGACCAGCCTCTCCACGTCCTCACGTTTAATCTTCTTCTTGCGCTGCTGGAAGGGAGACTGTCCCTCGATCATCTCATACAGCAGACAGCCTAGCGCCCACCAGTCTGGGCTGAATGTGTAGCGCTCATTCTTAACCACCTCCGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1214516 True 531 lncRNA 0.51 2 36448196 36449810

Neighbor

gene id symbol gene type direction distance location
LOC110539141 NA coding downstream 34632 36412165 ~ 36413564 (-)
LOC110537518 LOC106568005 coding downstream 47654 36397598 ~ 36400542 (-)
LOC110537517 wwc1 coding downstream 90173 36311115 ~ 36358023 (-)
LOC110537516 LOC106568002 coding downstream 137322 36292707 ~ 36310874 (-)
LOC110537510 mfap3 coding downstream 1046969 35396884 ~ 35401227 (-)
LOC110537521 LOC106568007 coding upstream 63383 36513193 ~ 36620615 (-)
LOC110537522 LOC106568008 coding upstream 179949 36629759 ~ 36641133 (-)
LOC110537523 LOC106568009 coding upstream 195259 36645069 ~ 36654649 (-)
LOC110537524 LOC106568011 coding upstream 220694 36670504 ~ 36700574 (-)
LOC110537525 NA coding upstream 257709 36707448 ~ 36709032 (-)
G1066331 LOC106568006 non-coding downstream 3715 36414086 ~ 36444481 (-)
G1066315 NA non-coding downstream 69013 36378788 ~ 36379183 (-)
G1066257 NA non-coding downstream 177885 36270087 ~ 36270311 (-)
G1066254 NA non-coding downstream 180794 36267160 ~ 36267402 (-)
G1066335 NA non-coding upstream 17688 36467498 ~ 36473377 (-)
G1066438 LOC100136012 non-coding upstream 166733 36616543 ~ 36741034 (-)
G1066587 NA non-coding upstream 403829 36853639 ~ 36853868 (-)
G1066163 NA other downstream 348722 36099030 ~ 36099474 (-)
G1066054 NA other downstream 508625 35939243 ~ 35939571 (-)
G1065969 NA other downstream 637802 35792355 ~ 35810394 (-)
G1064912 mrpl22 other downstream 963692 35476837 ~ 35484504 (-)
LOC110537509 galnt10 other downstream 1187662 35122172 ~ 35260534 (-)
G1067390 LOC106568016 other upstream 459621 36909431 ~ 36912757 (-)
G1067426 NA other upstream 487509 36937319 ~ 36937979 (-)
LOC110537534 LOC106568022 other upstream 570191 37019987 ~ 37039930 (-)
LOC110537540 LOC106567738 other upstream 1056070 37505206 ~ 37507238 (-)
LOC110537546 ppm1e other upstream 1153355 37603158 ~ 37667366 (-)

Expression


Co-expression Network