G1067390 (LOC106568016)


Basic Information

Item Value
gene id G1067390
gene name LOC106568016
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 36909431 ~ 36912757 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1215682
TCTCAACGGTTACATTTTGAACAGATTAATTACACATGTCTGAATAAGGCAGAGAGGGAAGGGAGTCAGAAGCTAAGAAGCATGACAGCAAAAAAAGAAGCTTTGTTACATGTGTATGAATGTATATAAACAGTGATACAGCCTCCCAACTCTTTGTGCATTATCAGACAACCCTTCAAAGAGGACGGAGGGGTAACTGACCATGTAGAAAAAGATATACAGCTCATTATCGTATCACAAGTTCCAAAGTACTGTGGTGATAGTTGGGAGTTTTGTCTCCCTACTCTACCGATTTCTGACTCATGTGATGTGACCAGAAATGACCCTCGACCTCCTCTTACTGTGCTATCGTAGCCTACTATTATCTGCTTGATGACTGTGATATTGTTACAGCAATATAAAGTGTTATTTACCACATCTGTTGACAGCAACTCAACCAACATGTATTAAAGTTGAAGTGATCTTGTTCGTTGGACAGGTTGATgacagagctgagaccagagaacgCATATCTTCTGGCTCTAGACTTATTTGAAGGTCATGTTTTTTTCATTCATCATATTTAGCTTTTATATACAGGCCCAAATATTCTTCCAACAGATGTATTAATCAGTTAGGATCTTATATCTGTGTTGTTAAAATTCGTATGTGTTTTAGTGCTATTAAAATACAATTATGAGTTACTGTATAACTCCTGGGTGAAGATGTTCAAGTGACAATGGTGCCTGTATCTCTATATTGGAGCAACAGCAGTGGGCACCATGGCGACCTTCACAGTACAGTATATGGATAAGAAGGGACCGAACTGTTTCATACATTTTTCAAATCATAAAAAAAAACTGGTTGGATTTCTATTCAAATGCAAGAAATTGCACATATTTGCATGATGAATTAAAACTAAGCCAGTTAAGTTTTAATACATAAAGGCTGCTAGAGATACTTCGACACGACTAAAGTTACAAGATTGGGCAATATTAATCACTACAAATATTGCTTATTGTAAAGGCATGATGCAAGCTTCAGAAATGGAAACACAACATCCCCATAACAGGGAAATGGCAAATCCACTTCATTCTGTTCTATGGCCCTCCAGAACCAACTTCACCTCCCTTCTTTCATAGAAACCCCAAAACTGATTGACTCAATTGAAAAGGCATAAGTAGAGATGAAAAAACGGACACAACaaagacagcgagacagagacaagCTTCAAGAGGGACAAAACACATAGAGACAAACATACTGTAGTGAAAGCATTTTAGCCGGGGAACAGAACAGATCTGTCATTTTTAGTGCTAAACCAAAGGCAGGAGTATAGCCTTTCAAATGGAAAGTATGGATGATATAAAGAGACACAGCAATGCCACTACTATAAATCAGTCCCGTCTTAATTTGTGCGTTATAAAGGTCTACATAAATATGTCATAGAGAGTATAATTCACACACAAGAGCTAGCTATCTTAGATGTAAGGTTACGTCAAGCAGCGTACTCAACAGCTGAGTACAATGGCACTTTCACATTGAAGGTTCAGTTCAGTTTCTAGACAAAGCTCCACCATGTGAGGAAGCTTGTGTTCCAAGACCTACAGTACAGCCAACTGCACTCAAACAGATATCAGTACAGAAGAGCTAATGGCGATGCAATGCCAGGGTTAGGGGGGAACGCAAAGTGCTGTCATGGATTAGGATGTGGGCATGTTCAATATCAAGCCATCTCCTTGATGTACTACCCACATGTACTAACTAAGCCATTTGATTGCATGTGTATTGTCTAGGTGTCTGTATCATTTGGTGTGGTAAGGCAGGGGgcagcagagacagtagattAATGATCATGAAACAGATACGGATATAGACTGTGCACTGCACAACAATGACAAGGATGAAAGGACTGGTTGATAGTGTGACTAATCATTTCCATGGCTGATGTACTCATTTCACAGCATTACTCATTTGTGCCATGCAGGAGAGTTGCTTCAGAGAGAAACAGTTTGACAGACTCATCTAACACACTATAGGCTACTTGCTCATGAGGGGATATCCGTGCCTTTGACAGCACTGTCCCGCTTCTCTTCAGTCTCCCCTTTGAAAAAGATGTCCCTTCAGATAAGTTAGTTGCTGTGTCCTCAAAAAGGAGGTGCAGAAGTGTAAACATGTTCTAAAACAAAAACCAGCAGCTTTGACAACGAACCATGAAGAGATCCAAATGGGCCTAGCTATATGAATACAGTTCCCATCATACTCCATTGTGCCCTTAAgcacagatccaggatcagtgTACccaccccaaaccctaaccttgacTATTAGGGGGAAAACGCTAGACGTGACCACAAATCAGTGTCCAGCAGCAACTCCATCCTACTTCGTTTCGACACACCAGCCCAGACTCCATTGTAACATCCTGCTTTTTCTCGGGGGTCTGACTGAACAAGGCCGTGTGTGAATTCACAGATCTATAAATCCTCTGGACAAGAACAGATCCTTATATACAAAGATGAGTGAATCTACATGATGCTGAGCTCTGGTCCACCCTCAAGAACAAGCAAGTAGCCCTTCTCCCCACATGGTAGACCTTCAGGACAATCACATGCTCACTGGACAATAAGAGCAGTGATTGACGGGGCTATTCTGTGGTTTGGCTAATCAGTGTCCATGTCCCCTCCACCCTGTATGAACTGTGTGGAATGATAAGCCACCATGCAGTTGTTGAAAAATTATGTCTTtactcttcttcctcttcctccacttgTTCTTCTACTTCATCTTTCAACTCAAGACCCTCCATCTCGCCATCCTccaactctccctccatcccctctccatcaCCCAAAGGATCCTCAATTTCTTCTTTCTCATCTTCGTAGGAAGAGATGGGTGAGTACTGGGGAAGGAAAAGGTGAGAGCTATCGGGGGCCTCAGAGCTGGCTAGAGGTGTGCTGATGGGGCCAGAGAAGGGGCTAGAGATGGGGCCAGAGATGGGGCCAGAGATGGGGCCAGAGATGGGGCCAGAgctggggagaggggggaaagactCAGACTCAGGACAAGGGCAAGGCTCGGGGTCccctgtagtagtgactgtagcagcagcaccagGGATTACTACGCCAGCCCCCAGGCCCGGTGAGAGAGCACAGATGTCGGGTAGGTGCTCCCTGATCTCCCCTGGCTCCAGGGGGTCTGGTCCACAGGGGTCGTGTTCGCTGCAGGACAGCCGTCCGTCCAGCTTGGAGATGAAGAGCATGCCGTCGCGGTGCAGTGTGCAGTAAGAGCTGGGACACATTTCACAAAAGGAAGCTGCCTCCTTACCACACAGGTCACACT

Function

NR:

description
histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1215682 True 3327 TUCP 0.44 1 36909431 36912757

Neighbor

gene id symbol gene type direction distance location
fgfr4 LOC106568015 coding downstream 119516 36770248 ~ 36789915 (-)
LOC110537525 NA coding downstream 200462 36707448 ~ 36709032 (-)
LOC110537524 LOC106568011 coding downstream 208857 36670504 ~ 36700574 (-)
LOC110537523 LOC106568009 coding downstream 254782 36645069 ~ 36654649 (-)
LOC110537522 LOC106568008 coding downstream 268298 36629759 ~ 36641133 (-)
rab24 LOC106568018 coding upstream 2054 36914811 ~ 36921183 (-)
trnal-caa-105 NA coding upstream 23463 36936220 ~ 36936330 (-)
LOC110537534 LOC106568022 coding upstream 107230 37019987 ~ 37039930 (-)
LOC100136717 LOC106568026 coding upstream 219028 37131785 ~ 37138071 (-)
LOC110537538 NA coding upstream 533129 37445886 ~ 37448950 (-)
G1067418 NA non-coding downstream 638 36908462 ~ 36908793 (-)
G1067417 NA non-coding downstream 2294 36906704 ~ 36907137 (-)
G1067400 NA non-coding downstream 26831 36882325 ~ 36882600 (-)
G1066593 NA non-coding downstream 48869 36860283 ~ 36860562 (-)
G1066588 NA non-coding downstream 54728 36854450 ~ 36854703 (-)
G1067388 pgmrc1 non-coding upstream 9610 36922367 ~ 36925320 (-)
G1067426 NA non-coding upstream 24562 36937319 ~ 36937979 (-)
G1067429 NA non-coding upstream 26973 36939730 ~ 36940724 (-)
G1067430 NA non-coding upstream 29935 36942692 ~ 36943176 (-)
G1067432 NA non-coding upstream 36766 36949523 ~ 36950357 (-)
G1066163 NA other downstream 809957 36099030 ~ 36099474 (-)
G1066054 NA other downstream 969860 35939243 ~ 35939571 (-)
G1065969 NA other downstream 1099037 35792355 ~ 35810394 (-)
G1064912 mrpl22 other downstream 1424927 35476837 ~ 35484504 (-)
LOC110537509 galnt10 other downstream 1648897 35122172 ~ 35260534 (-)
LOC110537540 LOC106567738 other upstream 593123 37505206 ~ 37507238 (-)
LOC110537546 ppm1e other upstream 690408 37603158 ~ 37667366 (-)
LOC110539142 NA other upstream 759425 37672182 ~ 37706371 (-)

Expression


Co-expression Network