G1067427


Basic Information

Item Value
gene id G1067427
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 36963572 ~ 36965183 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1215725
ttatattttacaCCAAGTGTTTTATTTCGTGAGCATCTGCTCAGGTCACGACTTACAGTAGCTCGACCCCTCTGAAACCCCCACTGGGGAACGACTATTTTACAAGCCACAGGGTCATAAGGATGACATAACAGGTGGGAGGACATGGTTGAGACAAGGGGGGCAACTGACAGAGCCAACATTTTTGTGGAGGCTGAGGACAAATATAAAAGGTCTAGATAGAGTTACAACACACAATTTTACACTAGAAGGGTTGTAATACTCCCAGGGCTGGCTGGCTAAACAAGAGTGATGCACCCGCAGGCGCTCTTTAACACATGGCACATTCCCAAATTCCTGTATGGTGAAAACGACTGTAGCTGCAGCCGACTGGTCTCTGGCCCTCGTCTTCGAGAGAAACACAGCAGGAAGGAACATAAGTGCATGTGAGGGTGGCTTCAGCTACAAACGCCTCCACTTCCTCAGTGATGTAGATCTGGTGCAGGTGCAAACGTGAGAGAGAGCTCATTCCCATTTGTGCCAGCCGTGtgtacagtagtagactagaaaGCAGGTGATTTGACATCTGGGTCACTGGATGGTGGTAGAGGTGCTAATGCAGGGTGGGAGACAGAGCTTTTTCACTTGGGAGCTGGGGGTCCAAACTCTGGCGGGTGAATTTGTCttcactcccccctctcctcgGTGATGGGGCTTAGGCACTGCTGAGGGCATTCACACCGGGCAACACTTACCCTCCAGAAGCTCCAGGCTGGCTCCGCCTCCTGTGCTGACATGGCTGACCTTGTCCTCTGTGCCCCATTTGGCGCAGCATGTAGCGGTGTCGCCTCCACCTGGGCATCACCAAGACAACAGGTAGGTAGCATTCAAATCATAGAGATCCTTCACTGTCATAGTGATCCCTCACTACTATAGATGTGAGGAAGAAAAGGTGCTTGGCACCATCTGGCGGTGAGAATGATATCAAGAGTGGATGAACCAAAGCTTCCAATCAAAATGGCAGTGCAAGTATAAACTTGAATAAATTATTTTTACCATGATGCGCAAGAGCGGGCTTTGTTTAACGAATGATCTCTATCATATGTGTATTTATTTGCAAAAGTTGGGATTAGGTGCAGGGACAAATATGTTTTTTGGTCATTGTACATAAACACAATGGTCGAGGGTCTTACCAATGATTGTGACGCAGCCTGACTTGGTGACCTCCACCACTTTGTCCATCAGGCTCTTGGTTCCTTTGGCGAAGTTCTCAAACTCAAACACACCCACGGGGCCGTTCCACACGATCTGCTTGGCTCTGCCTACAGCCTCAGCGAAGTGCTTGTTGCTCTCTGGTCCACAGTCCAGAccctggagagaacagagggtaACACCGGGACACAGAGCT

Function

NR:

description
phosphoglycerate kinase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1215725 True 1387 lncRNA 0.49 2 36963572 36965183

Neighbor

gene id symbol gene type direction distance location
trnal-caa-105 NA coding downstream 27242 36936220 ~ 36936330 (-)
rab24 LOC106568018 coding downstream 42389 36914811 ~ 36921183 (-)
fgfr4 LOC106568015 coding downstream 173657 36770248 ~ 36789915 (-)
LOC110537525 NA coding downstream 254603 36707448 ~ 36709032 (-)
LOC110537524 LOC106568011 coding downstream 262998 36670504 ~ 36700574 (-)
LOC110537534 LOC106568022 coding upstream 54804 37019987 ~ 37039930 (-)
LOC100136717 LOC106568026 coding upstream 166602 37131785 ~ 37138071 (-)
LOC110537538 NA coding upstream 480703 37445886 ~ 37448950 (-)
LOC110537540 LOC106567738 coding upstream 540023 37505206 ~ 37507238 (-)
LOC110537546 ppm1e coding upstream 637975 37603158 ~ 37667366 (-)
G1067432 NA non-coding downstream 13215 36949523 ~ 36950357 (-)
G1067430 NA non-coding downstream 20396 36942692 ~ 36943176 (-)
G1067429 NA non-coding downstream 22848 36939730 ~ 36940724 (-)
G1067426 NA non-coding downstream 25593 36937319 ~ 36937979 (-)
G1067388 pgmrc1 non-coding downstream 38252 36922367 ~ 36925320 (-)
G1067435 NA non-coding upstream 1056 36966239 ~ 36966572 (-)
G1067438 NA non-coding upstream 3907 36969090 ~ 36969321 (-)
G1067441 NA non-coding upstream 7482 36972665 ~ 36972971 (-)
G1067511 NA non-coding upstream 155220 37120403 ~ 37122215 (-)
G1067532 NA non-coding upstream 164197 37129380 ~ 37133553 (-)
G1067390 LOC106568016 other downstream 50815 36909431 ~ 36912757 (-)
G1066163 NA other downstream 864098 36099030 ~ 36099474 (-)
G1066054 NA other downstream 1024001 35939243 ~ 35939571 (-)
G1065969 NA other downstream 1153178 35792355 ~ 35810394 (-)
LOC110539142 NA other upstream 706999 37672182 ~ 37706371 (-)
LOC110537579 LOC106603438 other upstream 2076337 39041272 ~ 39072520 (-)

Expression


Co-expression Network