G1067511


Basic Information

Item Value
gene id G1067511
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 37120403 ~ 37122215 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1215829
AATAACATCTGTAGCCCATAGTATGGTGAGTAGCGTAGATCTCTTTTTAATATTACAAGTAACAATGGAAATCACcaactctgtctctgactctgtcttaATCTGTTTCTTTCTTCTAAGCATTTTTCCATCCTGTAGTCTGAGACCTTGTGGGAATCTGTGGTAGACAAGAATGTATGACAATTTAGGATAGCATTACCCCTAATTATCATCATGATTTCTGTGGTTTAGGCATATAGCTAACTAGTTGTGTTATCCAGCTAGCAATAATAGTGTGCTTGCTAATAACAAAGATTTTATAACTAACCCATGGTAGACcagagcctgtcgtttccaatgggagcaaattaatcatagtgggcagagAGATCCTATTGGTGCGTTCTAGCATTTATTTCCGTTAGGGAGCACCTACTCTGTGaaatgtgcaataactcaattcgcccttgcactcctaaacaacaAAACAGAAAGCTGTATGGCGATCAAATGTTTCAAAAatgagaaaattagcagaatgtcggccaaaacCCATATCGCtcaatcttctcccactgccggacACTGGGCTTCCACTCATCATATCTGGTAGTGAGTGGGAACGcaaaccggatgcttcacatttataaaTCCAGTGAAACATctggctcattgttctatctgtgcaaATAGGTTAGCTAGTGTTTAGCCACATTGAAAAGGAGCTAACATTACTCATAGTGTGTTGATACAAGTATCTAGATAAATTTAACGTGCTGGGTGTGTCTCACGTAGTACTATTTTGTATACTAACCTTCTTCTCGACTCCGTTCTTTGCGTACTGTTACATTCATGGTTTTCCTTATTTCCAGACTGTTGTGCAGATAGGCAGCACTGGACATGATGCCTTAAATAAATAATTGCACCAATGCATCCCATCCAATAGTGAGAATGTTCCTCAAAAGTGAAACCCTTGCAGGGTTATATGATGGAATAAAAGTTTTTCTTATGACCGTTTTAAGAGCATTTATAAACCATTATTCAACCATGCAACAAACGACACAGCACATCTAaatatatctgaccaaattatgaaagacaacagTTGTCATTTTGAATccagtaaagtcagtgtggaagaggtgaaaaaaatgattgttgtctatcaacaataacAAGCTGGGatagaaaatgactgaggataataaCGATtctgccactcctatttgccatatcttccaTTTAATTGTAATTGATGAAATTAGATTTTTATTCTATAAAGATTGTAATTGTGTCATTATGTTGTGAATATTGTAGAAAAATCCTCACAGCCGTTTTCCATACTAAAAAGTGAAGTGCCACTTCACAGcttaccatgtacagtagactacagacaatatgttcctccaccatgtacagtagactacagacaacatgttcctccaccatgtacagtagactacagacaacatgttcctccatcatgtacagtagactacagacaatatgtctgtagttaccatgtacagtagactacagacaatatgttcctccatcatgtacagtagactacagacaatatgttcctccaccatgtacagtagactacagacaatatgttcctccaccatgtacagtagactacagacaacatgttcctccatcatgtacagtagactacagacaatatgttcctccatcatgtacagtagactacagacaatatgttcctccatcatgtacagtagactacagacaatatgttcctccatcatgtacagtagactacagacaacatgttcctccaccatgtacagtagactacagacaatat

Function

NR:

description
PREDICTED: uncharacterized protein LOC106608566

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1215829 True 1813 lncRNA 0.38 1 37120403 37122215

Neighbor

gene id symbol gene type direction distance location
LOC110537534 LOC106568022 coding downstream 80473 37019987 ~ 37039930 (-)
trnal-caa-105 NA coding downstream 184073 36936220 ~ 36936330 (-)
rab24 LOC106568018 coding downstream 199220 36914811 ~ 36921183 (-)
fgfr4 LOC106568015 coding downstream 330488 36770248 ~ 36789915 (-)
LOC110537525 NA coding downstream 411434 36707448 ~ 36709032 (-)
LOC100136717 LOC106568026 coding upstream 9570 37131785 ~ 37138071 (-)
LOC110537538 NA coding upstream 323671 37445886 ~ 37448950 (-)
LOC110537540 LOC106567738 coding upstream 382991 37505206 ~ 37507238 (-)
LOC110537546 ppm1e coding upstream 480943 37603158 ~ 37667366 (-)
LOC110539142 NA coding upstream 552446 37672182 ~ 37706371 (-)
G1067441 NA non-coding downstream 147432 36972665 ~ 36972971 (-)
G1067438 NA non-coding downstream 151082 36969090 ~ 36969321 (-)
G1067435 NA non-coding downstream 153831 36966239 ~ 36966572 (-)
G1067427 NA non-coding downstream 155220 36963572 ~ 36965183 (-)
G1067432 NA non-coding downstream 170046 36949523 ~ 36950357 (-)
G1067532 NA non-coding upstream 7165 37129380 ~ 37133553 (-)
G1067539 NA non-coding upstream 21908 37144123 ~ 37145885 (-)
G1067651 NA non-coding upstream 182417 37304632 ~ 37310152 (-)
G1067654 NA non-coding upstream 190767 37312982 ~ 37313292 (-)
G1067708 NA non-coding upstream 285113 37407328 ~ 37410162 (-)
G1067426 NA other downstream 182424 36937319 ~ 36937979 (-)
G1067390 LOC106568016 other downstream 207646 36909431 ~ 36912757 (-)
G1066163 NA other downstream 1020929 36099030 ~ 36099474 (-)
G1066054 NA other downstream 1180832 35939243 ~ 35939571 (-)
LOC110537579 LOC106603438 other upstream 1919305 39041272 ~ 39072520 (-)
G1069456 LOC106567699 other upstream 1986085 39108300 ~ 39108962 (-)

Expression


Co-expression Network