G1067708


Basic Information

Item Value
gene id G1067708
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 37407328 ~ 37410162 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1216034
GCCTCTCCATATTCTATAGGGACTGTCTTACAGTGCTGAGAACAGACTACATGACTTAAATGACCAAATAAAAAGGAACTAGATGAAAACAACATGAGAGAACAACTGAAACTGGAAGAGATACATGTTTTTCTGTGAAGGAAGAGTCACCCTCTCATTGCCAATGATCATGAGGCCTAGAATCACGCCATAGAAAAATATATCAGCGGACAGCAACTAGCTAAACCTCTCTCTGGactgaagagggggaggaagagcacTGTTGTGGCCAGTGATAGTGACAAGAACTCTGCTAAAAGTAGTTTCCACCTGAGCTTTGAGAGAGACAATTAGACCAGCTGAGATGGAGGGAGGTTTCCTCACTTCAAAAGCAGTCAGTAAAAAGAGAGGACACAAACTAAAAGAGAAGGAAACTGCAGCCCTTAACTGCATAAGAGCCGCTCAATGcgccacacacatatacacacgcaaCGCCATATGAATGCCTAAACCCCCACTGGGTGTCATTTTACCCCATGTCAAGCTAGAATTCAAAAAGTGAAGTGTTGGAGAAAAAGTGAATTGCGCTGTAACTCTTCGTTGAGAaagacacttttttttggttgaagggatttttaaaatgtattttgcaacatATGGTAGCTTCAATGTGAagtttggtttaaaaaaaactaatCACATAACCTTCAAAATAAATGAAATTGCACAAATCAAATGTCTATGGAAGCCATATCTGTACAAGGTCTAAGGTCTCCATCATACTGGCATTTATTTTGCCAAAACAAGAGCTCTGCAATAAACTTATTATTCAAGGGACTTAAATGTCTCTCCAGCAGTGGACAACACGGTAAAACATCTTCATCTTCTTCCACCAATTTAAggaaaagcaaacaaacaaaaaaacctGTTCGTCTCAATTATTTCCAAAAATCTAGTGTCaatagcagtgtttcccaactcctcaATTACACctaacagcacacatttttgttgtagattaaagtcattgagggcttgatgattagttgacaagttgaatcaggtgtgcttgtccaggacTACAACAAAGATGTGtactgttggaggtactggatCACTGGAGTTGGGAAGCACTGGTATATTTTAACAGGCATTCTCAAGTTCTGCTATTGAATGACATTTGACCAACAACATGACCTATGTATATTCAGATATTATATACACAATGTACTGAAAGTCAGCAACTTGACATTACAGTAGATAAACTGATAGTGAGATGGCAGCCTGACCAAACACAAGAAAGTTGGAGACCTCTGGCACTTTGAAGGAGAGAGTGGGCACACTCTCAGACTTCTCAAACGCTTGGTAAAAGTAGAGTCCCAGTTTCAAACTCATCAGCTGAAAATAAAGGTTGCTTATAAACCTGGTAGGGTAATTAATAGTAAAGGCGAGGAGACAAAACCATTGGAGAGTATGGCTAGCTTTGTTCTGAACGAAATGAGTCAATGAGAATCAGATaacacgacaacatttaaaatcAATTATCTTAGACTTGGATATAGCACATGGCTAAACAAGGTGAATTGGAGTTGAGAAACCAAGACAAACTTGATGACTTCAGCAGTTTAGAAACAATGTGTCTGGTTCTAAATTCATACAGTCAGTTGAGGCTTTGGGAGCATGTAAATGTGAGTATGGAGACAGATCTGAACTGAGAGACGGGACTCCATGGACACCCATCTTATATAGGTCTTAGACAATGCCATCATGGCACATTCTCATTTGACTAGACAGCAAGGTAGCAGCAAAGGACTGTGGGTGATGTAGTTCTATCATGACTCTTTCACTAAAGCGCTAATTACGCAGCTTTCAAAAAACACAATATTGGTTGTCAACTATAAGGGGGCCAAATTAGTTGTCCGTTTGGAGTTGGTCGAGAATGGTTCAAAACCCATGGAACACAACCAACATTTAGTCAGtgtaaaaatgtatcatatagttAGTTATTCATTGTTGACCTATATGTCAACTACCACTGAGTGATAGATTCAATGGACATTGGTTGACCTGTAATGCATAGAGTATTATGAACCTTACGTACATAATCCAAATTGAATATGACATGATTAATGACGTTGTTGTTGACCATTATTATAGTCTCCATTTCCAACGTCACTGGCATCCAAACTCTATTAACATGCCACTTCTGACTCCTCACAATCACAATAAGCCTACTGTCCCTGGCTGACTTCTGAGACTAAACACAAACAAAACGAAACGAGAGTAAGAATGAAACGTAttcatgttcaaatcaaatctccAATCAAAATGGGAAGGCAAATCAAAAGCAAATAAATCCAGATTTTCATCAAACTTTTGGCAAACATTGTCaaaaatattttgtcacgacCAGTGGCTCTTGACATTGAATAAGGAGATCCAATAAGGCAAAAGGAGTGTATATAGTATAAATAAAAGTAAGTATAGATTGGGGGTGGTGATGTACAATGACATTATATGATTCTGTATATGCTTCTATGAGAATCAAGGCATTGGTCTTAATGTGTGCTGGGTTAAAGTTTGTCTCACAAATACCACAAGGTTATGAAATGATTGAAGGGTCATATTAGAAATGTGAATGAATGATACACAAACGCCATGAGACCAACGCTGGCTAATGCTAAAACTTCTGCAACAATCCTTGTAGTCGATCTTACAGAAGTGTGAAGTTTTCGTAGTCCCAATATAAAAAGAAACAGTTAAAAACCTAATGGACACAAACCCTACAGAGAGAACTACCAATACGTTGACAGTAATAACAAAAAACAAACCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1216034 True 2814 lncRNA 0.38 2 37407328 37410162

Neighbor

gene id symbol gene type direction distance location
LOC100136717 LOC106568026 coding downstream 269257 37131785 ~ 37138071 (-)
LOC110537534 LOC106568022 coding downstream 367398 37019987 ~ 37039930 (-)
trnal-caa-105 NA coding downstream 470998 36936220 ~ 36936330 (-)
rab24 LOC106568018 coding downstream 486145 36914811 ~ 36921183 (-)
fgfr4 LOC106568015 coding downstream 617413 36770248 ~ 36789915 (-)
LOC110537538 NA coding upstream 35724 37445886 ~ 37448950 (-)
LOC110537540 LOC106567738 coding upstream 95044 37505206 ~ 37507238 (-)
LOC110537546 ppm1e coding upstream 192996 37603158 ~ 37667366 (-)
LOC110539142 NA coding upstream 264499 37672182 ~ 37706371 (-)
ska2 ska2 coding upstream 303265 37712908 ~ 37740454 (-)
G1067654 NA non-coding downstream 94036 37312982 ~ 37313292 (-)
G1067651 NA non-coding downstream 97176 37304632 ~ 37310152 (-)
G1067539 NA non-coding downstream 261443 37144123 ~ 37145885 (-)
G1067532 NA non-coding downstream 273775 37129380 ~ 37133553 (-)
G1067511 NA non-coding downstream 285113 37120403 ~ 37122215 (-)
G1067716 NA non-coding upstream 3790 37413952 ~ 37414308 (-)
G1067733 NA non-coding upstream 29893 37440055 ~ 37440337 (-)
G1067679 NA non-coding upstream 33651 37443813 ~ 37444315 (-)
G1067749 NA non-coding upstream 56452 37466614 ~ 37553913 (-)
G1067783 LOC106603469 non-coding upstream 109633 37519795 ~ 37536856 (-)
G1067426 NA other downstream 469349 36937319 ~ 36937979 (-)
G1067390 LOC106568016 other downstream 494571 36909431 ~ 36912757 (-)
G1066163 NA other downstream 1307854 36099030 ~ 36099474 (-)
G1066054 NA other downstream 1467757 35939243 ~ 35939571 (-)
LOC110537579 LOC106603438 other upstream 1631358 39041272 ~ 39072520 (-)
G1069456 LOC106567699 other upstream 1698138 39108300 ~ 39108962 (-)

Expression


Co-expression Network