G1067828


Basic Information

Item Value
gene id G1067828
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 37596496 ~ 37597009 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1216187
gtccgtaagcttgagttcatttgcacacaaaaaatcatacaatgatggaaagacctgtgtgttgtccttgttaatgcagacagaaaagagaaatgtgctccaacttcttaatcatagccttaattttgtcccgcacattgaatatagttgcggagagtccctgtaatcctagattcagatcattcaggcgagaaaaaacatcacccagataggccagttgtgtgagaaactcgtcatcatgcaagcggtcagacaagtgaaaattatggtcagcgAAGAAAACTTTAAGCCTGTTTCTCAATTAAAACATgcgtcaatactttgccccttgataaccagtgcacttctgtatgttgtaaaagcgttacatggtcgctgcccatatcattgcataatgcagaaaatacactaGAGTTCAGGGGTCTTGCTTTAACGAAGTGAACCATTTTCACTatagtgtccaaaatgtctttgaagctgtcaggcattctcttggcagcaagagcctctcggt

Function

NR:

description
zinc finger BED domain-containing protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1216187 True 514 lncRNA 0.41 1 37596496 37597009

Neighbor

gene id symbol gene type direction distance location
LOC110537540 LOC106567738 coding downstream 89258 37505206 ~ 37507238 (-)
LOC110537538 NA coding downstream 147546 37445886 ~ 37448950 (-)
LOC100136717 LOC106568026 coding downstream 458425 37131785 ~ 37138071 (-)
LOC110537534 LOC106568022 coding downstream 556566 37019987 ~ 37039930 (-)
trnal-caa-105 NA coding downstream 660166 36936220 ~ 36936330 (-)
LOC110537546 ppm1e coding upstream 6149 37603158 ~ 37667366 (-)
LOC110539142 NA coding upstream 77652 37672182 ~ 37706371 (-)
ska2 ska2 coding upstream 116418 37712908 ~ 37740454 (-)
LOC110539143 LOC106567739 coding upstream 180978 37777987 ~ 37790177 (-)
LOC110537549 LOC100380745 coding upstream 205587 37802596 ~ 37886734 (-)
G1067821 NA non-coding downstream 7166 37586289 ~ 37589330 (-)
G1067791 NA non-coding downstream 37020 37558571 ~ 37559476 (-)
G1067792 NA non-coding downstream 38103 37557760 ~ 37558393 (-)
G1067749 NA non-coding downstream 42583 37466614 ~ 37553913 (-)
G1067783 LOC106603469 non-coding downstream 59640 37519795 ~ 37536856 (-)
G1067832 NA non-coding upstream 12349 37609358 ~ 37609590 (-)
G1067876 NA non-coding upstream 116934 37713943 ~ 37714433 (-)
G1067872 NA non-coding upstream 161945 37758954 ~ 37760121 (-)
G1067924 NA non-coding upstream 177303 37774312 ~ 37776383 (-)
G1067426 NA other downstream 658517 36937319 ~ 36937979 (-)
G1067390 LOC106568016 other downstream 683739 36909431 ~ 36912757 (-)
G1066163 NA other downstream 1497022 36099030 ~ 36099474 (-)
LOC110537579 LOC106603438 other upstream 1444511 39041272 ~ 39072520 (-)
G1069456 LOC106567699 other upstream 1511291 39108300 ~ 39108962 (-)
fkbp6 LOC106567715 other upstream 1739095 39336054 ~ 39343006 (-)

Expression


Co-expression Network