Gene
RNA
| Item | Value |
|---|---|
| gene id | G1068082 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 38056384 ~ 38056616 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1216492 | True | 233 | lncRNA | 0.43 | 1 | 38056384 | 38056616 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mcama | LOC106567672 | coding | downstream | 20904 | 37970263 ~ 38035480 (-) |
| polr2j | polr2j | coding | downstream | 117955 | 37936226 ~ 37938429 (-) |
| LOC110537551 | LOC106567669 | coding | downstream | 133681 | 37899853 ~ 37922703 (-) |
| LOC110537550 | LOC106567668 | coding | downstream | 164702 | 37887443 ~ 37891682 (-) |
| LOC110537549 | LOC100380745 | coding | downstream | 169650 | 37802596 ~ 37886734 (-) |
| mis12 | mis12 | coding | upstream | 1159 | 38057775 ~ 38062791 (-) |
| LOC110537557 | NA | coding | upstream | 40364 | 38096980 ~ 38104174 (-) |
| nup88 | LOC106567676 | coding | upstream | 102984 | 38159600 ~ 38181614 (-) |
| LOC118937669 | NA | coding | upstream | 185492 | 38242108 ~ 38247683 (-) |
| LOC110537564 | LOC106567681 | coding | upstream | 248577 | 38305193 ~ 38314622 (-) |
| G1068021 | NA | non-coding | downstream | 107803 | 37948363 ~ 37948581 (-) |
| G1067924 | NA | non-coding | downstream | 280001 | 37774312 ~ 37776383 (-) |
| G1067872 | NA | non-coding | downstream | 296263 | 37758954 ~ 37760121 (-) |
| G1067876 | NA | non-coding | downstream | 341951 | 37713943 ~ 37714433 (-) |
| ska2 | ska2 | non-coding | downstream | 342582 | 37712908 ~ 37740454 (-) |
| G1068091 | NA | non-coding | upstream | 16239 | 38072855 ~ 38073098 (-) |
| G1068092 | NA | non-coding | upstream | 18240 | 38074856 ~ 38075215 (-) |
| G1068093 | NA | non-coding | upstream | 22524 | 38079140 ~ 38079979 (-) |
| G1068166 | NA | non-coding | upstream | 161504 | 38218120 ~ 38218402 (-) |
| G1068168 | NA | non-coding | upstream | 162760 | 38219376 ~ 38219821 (-) |
| LOC110539142 | NA | other | downstream | 350013 | 37672182 ~ 37706371 (-) |
| LOC110537546 | ppm1e | other | downstream | 389130 | 37603158 ~ 37667366 (-) |
| LOC110537540 | LOC106567738 | other | downstream | 549240 | 37505206 ~ 37507238 (-) |
| LOC110537534 | LOC106568022 | other | downstream | 1025700 | 37019987 ~ 37039930 (-) |
| G1067426 | NA | other | downstream | 1118405 | 36937319 ~ 36937979 (-) |
| LOC110537579 | LOC106603438 | other | upstream | 984904 | 39041272 ~ 39072520 (-) |
| G1069456 | LOC106567699 | other | upstream | 1051684 | 39108300 ~ 39108962 (-) |
| fkbp6 | LOC106567715 | other | upstream | 1279488 | 39336054 ~ 39343006 (-) |
| G1071725 | NA | other | upstream | 2982250 | 41038866 ~ 41039931 (-) |
| G1073009 | NA | other | upstream | 3989247 | 42045863 ~ 42062632 (-) |
