Gene
RNA
| Item | Value |
|---|---|
| gene id | G1069480 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 39124230 ~ 39185219 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: Meckel syndrome type 1 protein homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1218012 | True | 324 | lncRNA | 0.47 | 3 | 39124230 | 39185219 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537583 | LOC106567696 | coding | downstream | 38331 | 39077640 ~ 39085899 (-) |
| LOC110537580 | LOC106567695 | coding | downstream | 46640 | 39073248 ~ 39077590 (-) |
| LOC110537579 | LOC106603438 | coding | downstream | 51710 | 39041272 ~ 39072520 (-) |
| LOC110537576 | LOC106567693 | coding | downstream | 96322 | 39014593 ~ 39027908 (-) |
| LOC110537578 | LOC106567694 | coding | downstream | 118111 | 38997382 ~ 39006119 (-) |
| LOC110537596 | NA | coding | upstream | 55438 | 39240657 ~ 39245631 (-) |
| LOC110537598 | LOC106567714 | coding | upstream | 123997 | 39309216 ~ 39312123 (-) |
| fkbp6 | LOC106567715 | coding | upstream | 150835 | 39336054 ~ 39343006 (-) |
| zgc:171740 | LOC106567716 | coding | upstream | 158396 | 39343615 ~ 39358852 (-) |
| si:dkey-183i3.6 | LOC106567717 | coding | upstream | 185975 | 39371194 ~ 39377049 (-) |
| G1069462 | NA | non-coding | downstream | 9778 | 39113832 ~ 39114452 (-) |
| G1069455 | LOC106567699 | non-coding | downstream | 16091 | 39107064 ~ 39108139 (-) |
| G1069285 | NA | non-coding | downstream | 213942 | 38856053 ~ 38910288 (-) |
| ripply3 | ripply3 | non-coding | downstream | 347771 | 38766085 ~ 38776459 (-) |
| G1069503 | NA | non-coding | upstream | 9638 | 39194857 ~ 39249331 (-) |
| G1069512 | NA | non-coding | upstream | 31069 | 39216288 ~ 39276066 (-) |
| G1069468 | NA | non-coding | upstream | 46809 | 39232028 ~ 39240517 (-) |
| G1069469 | NA | non-coding | upstream | 50873 | 39236092 ~ 39236563 (-) |
| G1069533 | NA | non-coding | upstream | 96439 | 39281658 ~ 39286252 (-) |
| G1069456 | LOC106567699 | other | downstream | 15268 | 39108300 ~ 39108962 (-) |
| LOC110539142 | NA | other | downstream | 1417859 | 37672182 ~ 37706371 (-) |
| LOC110537546 | ppm1e | other | downstream | 1456976 | 37603158 ~ 37667366 (-) |
| LOC110537540 | LOC106567738 | other | downstream | 1617086 | 37505206 ~ 37507238 (-) |
| G1071725 | NA | other | upstream | 1853647 | 41038866 ~ 41039931 (-) |
| G1073009 | NA | other | upstream | 2860644 | 42045863 ~ 42062632 (-) |
| G1074731 | NA | other | upstream | 3518784 | 42704003 ~ 42713923 (-) |
| G1075335 | NA | other | upstream | 4378566 | 43563785 ~ 43564240 (-) |
